Pandoraea norimbergensis: AT302_21005
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Entry
AT302_21005 CDS
T04226
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnr03021
]
AT302_21005
Transcription machinery [BR:
pnr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AT302_21005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_28
Sigma70_ECF
HTH_Tnp_1
Phage_CI_repr
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALS61889
UniProt:
A0A0U2YE88
LinkDB
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Position
complement(2978424..2979041)
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AA seq
205 aa
AA seq
DB search
MTDIPGTTGRPGDVETPRAGASDPQDVRREHLNQTLLQVGQGSQEAFGELYKLTSSHLFG
VILRMVREQAEAEDMLQDVFVTVWRRADAYDATRGNAMTWLIALARNRTIDRLRQHREAA
LDDEQALDIPDDNPSPAALAEASEDRQRLEACMEKLEGKQRAAVREAFFSGATYSELAAH
LSVPLGTLKSWIRRSLMQLKVCLEQ
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgactgacataccaggtaccactggacggccaggcgatgtcgagacgccccgcgccggg
gcgtctgacccacaggatgtgcggcgcgagcacctgaaccagacgctgttacaggtcggg
cagggcagtcaggaggcgttcggcgagttgtacaagctgacgtcgtcccacctgttcggc
gtgatcctgcgcatggttcgcgagcaggcagaagccgaagacatgctccaggacgtgttt
gtcactgtctggcgacgtgccgacgcgtacgacgcgacccgtggcaacgccatgacgtgg
ctgattgccttggcgcgcaaccggacgatcgaccgccttcgccagcaccgcgaggccgcg
ctcgatgacgagcaggccctcgacattcccgacgacaaccccagccccgcagcccttgcc
gaagcgagcgaagatcgccagcggctggaggcgtgcatggaaaagctcgaaggcaagcaa
cgcgccgccgtgcgcgaggcctttttcagcggtgcaacgtatagcgaactggcggcgcat
ctgagcgttccgctcggcacgttgaaaagctggattcgccgcagtctgatgcagttgaaa
gtgtgcctcgaacaatga
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