Polynucleobacter asymbioticus: Pnuc_0241
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Entry
Pnuc_0241 CDS
T00502
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pnu
Polynucleobacter asymbioticus
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnu03400
]
Pnuc_0241
Enzymes [BR:
pnu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pnuc_0241
DNA repair and recombination proteins [BR:
pnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pnuc_0241
Prokaryotic type
Pnuc_0241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABP33462
UniProt:
A4SVE8
LinkDB
All DBs
Position
complement(240900..242378)
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AA seq
492 aa
AA seq
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MQKGLVWLRRDLRLYDNAALHYALKESKQVWVTFIFDEEILKPLLKGELDAQRLKHDRRV
DFIWQGLEQIDEELRKQGGGLIVRFGKPVECIPQIAKDLGVDTVFTNHDYEPSAIARDEA
VKTLLAKSDIQFESFKDQVIFEKKEILTNSNTVFSIFTPYKNNWLKTLQEKDLVAYECSA
KPGQFAAIPKKLAQEIPTLESMGFCKTGIEAYLPPGAEGGQAFLEDFLPRIDQYQVGRDF
PAIKGVSYLSTHLRFGMLSIRGLVREAHRRMLAGSMGATIWLSELIWRDFYFMILANHPR
LAKGASFKPDYDNIVWEQGSVAKKLFAAWCEGKTGYPLVDAAMHQLNQSGYMHNRLRMVV
ASFLTKDLGVDWRWGEAYFAEHLNDFELSSNNGGWQWASSSGCDAQPYFRIFNPITQSEK
FDPEGKFIRRYLPQLNHLSKKSIHAPWKAGHIELEAAGITLGRDYPLPVVDHDEARKKTL
VRYSVVKKVTEA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaggacttgtttggcttcgtcgagatcttcgcctgtatgacaatgcagcgctc
cattacgccctcaaggagagtaaacaggtttgggtaacctttatttttgatgaagagatt
ctcaagcccctactcaagggagagctagatgctcagagattaaaacatgaccgccgagtc
gactttatctggcaaggtctagagcaaatcgatgaggaactccgcaaacaaggaggtggt
ctgattgtgcgctttggtaagcccgtcgaatgcattccccaaattgccaaagaccttggt
gttgataccgtattcaccaatcatgattacgagccatctgctattgcccgtgatgaagca
gtaaagacattgctagcaaaatctgatattcaatttgagagtttcaaagatcaagtcatt
ttcgagaaaaaagaaattttgaccaactcgaatacggttttctccatctttacgccttat
aaaaacaactggcttaaaacccttcaagaaaaagatttagtggcttatgaatgctctgca
aagccgggacaattcgctgccataccaaaaaaactggctcaagaaattcccaccttagaa
tctatgggcttttgcaagactggtatagaagcctatttaccgccgggcgcagagggtggt
caagcttttttagaagactttcttccgcggattgatcaataccaggttgggagagacttt
cctgctatcaagggagttagttatctctcaactcacctacgctttggcatgctatctatt
agaggcttggttcgcgaagcacatcgcagaatgttagcgggcagcatgggtgcaacgatt
tggttaagcgaattgatttggcgtgatttctatttcatgattttggcaaatcatccacgt
cttgcaaaaggcgcgtcttttaaacccgactacgacaatattgtttgggaacaaggcagt
gttgcaaagaaattattcgccgcctggtgtgaaggtaagactggctacccgctagtcgat
gcagctatgcatcaactgaatcaaagtggctatatgcacaatcgtctgcgtatggtggta
gctagcttcctcactaaggacctaggagtcgattggcgctggggtgaggcgtattttgca
gaacacctcaatgacttcgagctctcatccaataatgggggatggcaatgggcatcttct
tccggctgtgatgcacagccctatttccgcatctttaaccccattactcagtcagagaag
ttcgatcctgaaggtaaatttattcgtcgttatttacctcagctcaatcatttatcgaaa
aaatccattcatgcgccctggaaagctggccacattgagttagaggcggcaggtattact
ttgggacgcgattatccacttccagttgtggaccatgacgaagcccgtaaaaaaacctta
gtgcgttatagcgtcgttaaaaaagttaccgaggcatag
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