Polynucleobacter asymbioticus: Pnuc_0921
Help
Entry
Pnuc_0921 CDS
T00502
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pnu
Polynucleobacter asymbioticus
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnu03009
]
Pnuc_0921
Enzymes [BR:
pnu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Pnuc_0921
Ribosome biogenesis [BR:
pnu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pnuc_0921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ub-Mut7C
NaeI
Motif
Other DBs
NCBI-ProteinID:
ABP34137
UniProt:
A4SXC3
LinkDB
All DBs
Position
915977..916933
Genome browser
AA seq
318 aa
AA seq
DB search
MAGERLDKVLAGSLPDYSRNRLKAWVEAGAVMVDGKVTKARYLLRGGESVKVFPQEMPEQ
FAFSPENIPLEVVYEDDSIIVINKPPGLVVHPAAGNWSGTLLNGLLHRFPELKSLPRAGI
VHRLDKDTSGLMVVARTAHAQTALVRQLQERTVGRRYLAWVWGDAPSQGKVLASVGRDQR
DRLKMAAGSPQGKPAATLFRRIAKGNVENAPVALLECRLETGRTHQIRVHLESLGFPLVG
DPVYRKKAPGVAKALSFDRQALHAFALSLQHPVTQELQTWFRLPPVDLINLLPQVGMSTH
DLPEEGVVLASIKNEVRA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgaacgcctggacaaggtgttggctggatctttgcctgattattcccgtaat
cggctcaaggcttgggttgaagctggcgcagttatggttgatggaaaagtcaccaaagcc
agatatttattgagggggggcgagagtgttaaggtatttcctcaagaaatgcctgaacaa
tttgcctttagccccgaaaacatccctttggaggtggtttacgaggatgactccatcatt
gtgattaacaagccgccgggattggtggtacatcctgctgcaggcaactggtcaggcacc
ttattaaatggcctcttacaccgttttccagagttaaagtctctgccacgcgcaggtatt
gttcatcgtctcgataaggatacgtcaggactaatggtagtggcacgtaccgctcacgcc
caaaccgcattggttaggcagttgcaagagcgaacggtgggtcgaagatatctagcttgg
gtttggggtgatgcgcccagccagggcaaggtgttggcctcggtaggtcgtgatcaacga
gatcgcttaaaaatggctgctggcagtcctcagggtaagccggcggctactttgtttaga
cgaatcgctaaaggaaacgtagaaaatgctccagtggctttattggagtgtcgtttggaa
acagggcgaacccatcaaatccgcgttcatcttgagtctttagggtttcctttggtgggt
gacccggtatatcgcaagaaagcgccgggagttgccaaagccctatcctttgatcgtcag
gcgctacatgcttttgctctgagcctacagcatcccgttacccaagaattgcaaacttgg
tttcgtttgccacccgttgatctaattaacctactacctcaagtcggcatgtccacgcat
gatttgcctgaagaaggggttgtcttagcatctatcaagaatgaagtacgggcatga
DBGET
integrated database retrieval system
