Segatella oris: NCTC13071_01896
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Entry
NCTC13071_01896 CDS
T06067
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
poc
Segatella oris
Pathway
poc00540
Lipopolysaccharide biosynthesis
poc01100
Metabolic pathways
poc01250
Biosynthesis of nucleotide sugars
Module
poc_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
poc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC13071_01896 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
poc01005
]
NCTC13071_01896 (kdsA)
Enzymes [BR:
poc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NCTC13071_01896 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
poc01005
]
Lipid A
NCTC13071_01896 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
VEH15881
UniProt:
A0A448L7I8
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Position
1:2200536..2201288
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AA seq
250 aa
AA seq
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MQPIFIAGPCVIESATLLNTVAHELVRINRKYGINIIFKASFDKANRTSIHSFRGPGLDK
GLQMLADIKAEYGLQILTDIHESYQAEAAGEVCDVLQIPAFLCRQTDLLVAAAKTGKTIN
IKKAQFLSGADMRYPVEKAMESGAKEVWLTERGNSFGYNNLVVDFRNIPDMKEIVPTVIM
DCTHSVQRPGAGNGKTSGDRRFVPSMALAAKAFGATGYFFEVHPNPDKGLSDGPNMLELD
KLEQLIGQLL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccatatttatcgcaggtccctgtgtcatagaatcggcaactttactgaacact
gttgcccatgaattagtaagaataaaccgcaaatacggtatcaatattatcttcaaagca
tcgttcgacaaagctaaccgcacgtcaatccactctttccgtggcccgggattggataaa
ggtttgcaaatgcttgcagacataaaagccgaatatggcctgcaaatactaactgacatc
catgaaagctatcaggctgaagcagcaggagaggtgtgcgatgtgcttcagataccggcg
tttctgtgtcgtcagaccgatttattagttgcagcagcaaagacaggaaaaacaataaat
atcaagaaagcacagttcttaagcggtgcagacatgcgttatcctgtagagaaagctatg
gaaagcggagccaaagaagtgtggcttacagaacgtggaaacagctttggttacaacaac
ttagtggttgattttcgcaatattccagatatgaaagagattgttccgacggtaatcatg
gactgcacgcacagtgtgcaacgccctggtgcaggcaatggaaagacctccggtgaccga
agatttgttccttcaatggctttagcagcgaaagctttcggggcaaccggatatttcttt
gaggttcatcccaatcctgacaaaggacttagtgacggcccgaacatgctggaacttgac
aaactggaacaattaataggacaattattgtag
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