Paenibacillus odorifer: PODO_04930 Help Entry PODO_04930        CDS       T03326                                  Name (GenBank) DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism pod  Paenibacillus odorifer Pathway pod03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pod00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     PODO_04930  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pod03400]     PODO_04930 Enzymes [BR:pod01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      PODO_04930 DNA repair and recombination proteins [BR:pod03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      PODO_04930 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase Motif Other DBs NCBI-ProteinID:  AIQ72657 UniProt:  A0A264DWB8 LinkDB All DBs Position complement(1135897..1136844) Genome browser AA seq 315 aa AA seqDB search MKLQPIIPFEPILAGQLPAGDQWIAQIKWDGVRMLSYYDGSTTQLINRRGNYRTMQYPEL TDVSAYCKAGSVILDGEIIALKDGKPSFHEVMRRDSLKNGSTISVVRHQVPVIYMIFDIL FYNGQSTMDQPLFLRQQLLSDILLPHPHVQAVPSYTDPTELFAATQNQRLEGIVCKDINS TYAPGGKDKRWQKRKISSDITAVAGGVTFRDGIVNALLLGLYDDKGNLHYIGHAGPGKLT VQDKRDLTAEAHRLKLDRMPFADVPQRGKGAFWIKPELVFKVHFLEWNTSGTLRQPVTQA KVDLPPESCTMEQKG NT seq 948 nt NT seq  +upstreamnt  +downstreamnt atgaagcttcagcccattattccttttgaacctatactggctgggcagcttccagcaggt gaccagtggatcgcacaaattaaatgggacggtgtgcggatgttgtcctattacgatgga agcactactcagcttattaacagacgtggcaattaccgtaccatgcaatacccggagctt actgatgtatctgcttactgcaaggctggctccgttattcttgatggtgagatcatcgca ctcaaggacggcaaaccctcatttcacgaggtgatgcggagggacagtttaaaaaatggt tccacgatttccgtcgttaggcatcaggttcctgtcatttatatgatttttgatattctg ttttataatggccaatcgacgatggatcaaccattattcttgcggcagcagctgttaagt gacattctgctgccccatccccatgttcaagctgtgccaagttataccgatcctacagaa ctgttcgccgccactcagaaccagcgtttggaaggaatcgtctgcaaggacatcaacagt acttatgctccgggcggaaaagataaacgttggcagaaacgcaaaatcagttctgatatt acagctgtagccgggggtgtgacgttccgtgacggtatcgtcaacgcactacttcttggt ctttatgatgataaaggaaatttgcattatatcggacatgccggtccgggcaaattgact gtacaggataaacgcgacttaactgcggaggcacaccgccttaagctggatcggatgccc tttgctgatgttccacagcgaggcaagggtgctttttggataaagccggagctcgtcttc aaagttcattttctggaatggaacacctcaggcactctgcgtcagcctgttactcaagct aaagtggatcttcccccggagtcatgcacaatggagcaaaaaggataa

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