Paenibacillus odorifer: PODO_12895
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Entry
PODO_12895 CDS
T03326
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pod
Paenibacillus odorifer
Pathway
pod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PODO_12895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_12895
Enzymes [BR:
pod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PODO_12895
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PODO_12895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
COMM_domain
Motif
Other DBs
NCBI-ProteinID:
AIQ74070
UniProt:
A0A1R0XCQ9
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All DBs
Position
2928070..2928834
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AA seq
254 aa
AA seq
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MNLVSWNVNGLRACVKKGFDEYFKEVEADIFCVQETKLQEGQIVLEQGEEYNQYWNYAVK
KGYSGTAIFTKIKPISARYGMEEDEEAEGRIITLEFEHFYLVNVYTPNAKRDLARLDYRM
EWEDRFRNYLLELDKLKPVVVCGDMNVAHQDIDIKNAKANRGNSGFTDEERGKMSTLLES
GFIDTFRYFHPELEGVYSWWSYMPKVRERNVGWRIDYFLASSRLAPNLLDAQIDCHIMGS
DHCPVILKLADFTD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ataaatttggtatcatggaatgtgaatggccttcgggcctgtgtgaaaaaagggtttgat
gaatattttaaggaagtagaagcagatattttctgtgttcaggagacaaagctgcaagaa
gggcagattgttctggaacagggtgaagaatacaatcaatattggaattatgcagtgaaa
aaagggtattcaggcacagctatattcaccaaaatcaagccgatctctgcgagatacgga
atggaagaggatgaagaagcggaaggccggattattacgctggagttcgaacatttttat
ctagtgaatgtgtatacaccaaatgccaaacgagatctggctagattggattacagaatg
gaatgggaggaccgcttccgcaattaccttctggaactggacaagctaaaaccagtcgtt
gtatgcggcgatatgaacgtagcccatcaggatattgatatcaaaaatgctaaagctaac
cgcggaaactctggctttaccgatgaagaaagaggaaaaatgagtacgctgctggagtcc
ggcttcatagatacctttagatattttcatccagagcttgaaggcgtttattcatggtgg
tcttatatgccgaaggtgagagaacggaatgtaggctggcggattgattatttcctagct
tcttctagacttgcacctaatctgctggatgcccaaattgattgccacattatggggagc
gatcattgcccggtcatcctcaagcttgctgatttcactgactag
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