Paenibacillus odorifer: PODO_13450
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Entry
PODO_13450 CDS
T03326
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pod03019
]
PODO_13450
03009 Ribosome biogenesis [BR:
pod03009
]
PODO_13450
03036 Chromosome and associated proteins [BR:
pod03036
]
PODO_13450
Enzymes [BR:
pod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PODO_13450
Messenger RNA biogenesis [BR:
pod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PODO_13450
Ribosome biogenesis [BR:
pod03009
]
Eukaryotic type
90S particles
RNase
PODO_13450
Prokaryotic type
rRNA processing factors
PODO_13450
Chromosome and associated proteins [BR:
pod03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PODO_13450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Lzipper-MIP1
Ribosomal_L29
Motif
Other DBs
NCBI-ProteinID:
AIQ74172
UniProt:
A0A1R0YQH0
LinkDB
All DBs
Position
3033292..3033996
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AA seq
234 aa
AA seq
DB search
MKGELKQLQQQLQIQFHDSVLLKQAFTHASYVNEHRFNQHQDNERLEFLGDAVLELTVSE
YLYNLLPDRPEGELTKLRAAIVCEPSLVKFAESLGFGRYVLLGKGEELTGGRTRPALLAD
VFESFVGALYLDQGLETVRSFLDNHVFPLVETDGKLQMQMTDYKTELQELIQQHNMGTLE
YRIIEERGPAHEREFVSEVYMANRSLGKGSGRSKKEAEQQAAAAALLHLKEDGA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaggagaactgaagcagttacaacagcaacttcaaatccaatttcacgattctgtg
cttctgaagcaggcctttacccatgcatcctatgtgaatgaacaccgtttcaatcagcat
caggacaatgagcgtctcgaatttcttggggatgcagttctggagttaacggtttctgaa
tatttgtacaatctattgccagaccgacctgagggagagttgaccaagctgcgggccgct
attgtatgcgagccttcactggtcaaatttgcggagagtttaggttttggccgttatgta
ctgttgggcaaaggggaagaacttacgggcggacgtactcgcccggccctgctggctgat
gtattcgaatccttcgtgggagcgctttatctcgaccaaggactggaaacggtgcgaagt
tttcttgataatcacgtatttcctctggtggaaacggatgggaaattgcaaatgcagatg
accgattataagacggaactgcaagagctaattcagcagcacaatatgggtacattggaa
tatcgaattatagaagaacggggacccgcacatgagcgtgaattcgtctcagaggtgtat
atggctaaccgttcacttggtaaaggaagcggccggtccaagaaggaagcagagcagcag
gcagcggcagctgcactcttgcatctgaaagaggacggtgcctga
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