Paenibacillus odorifer: PODO_17100
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Entry
PODO_17100 CDS
T03326
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00500
Starch and sucrose metabolism
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PODO_17100
Enzymes [BR:
pod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
PODO_17100
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Malt_amylase_C
Cyc-maltodext_C
hDGE_amylase
GHL6
Motif
Other DBs
NCBI-ProteinID:
AIQ74836
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Position
3834509..3836191
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AA seq
560 aa
AA seq
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MTKKHTINGLLSLSLTAFLLSGCSGNNNNIPSSASPFPSPKANTVQDTTTPPAAKTITTD
EQPSTVYYEIFVRSFYDSDGDGIGDLKGITKKLDYLNDGNPDTTDDLGIGGIWLMPINPS
PSYHGYDVTDYRAINPDYGTIEDLQELVTEAHKRGIKVIMDLVVNHTSKEHPWFVDSAKN
KDSKYRDWYIWAEDQGRPANGASAAGSGNAWHSLLGSHYLGGFWEGMPDLNFDHTEVRNE
MKDIGKFWLEQGVDGFRLDAAKHIYEDLLTDKSQATTHKNVFWWQDFRKAMNEVNPQAYI
VGEVWENSAVTVGTYLDQAFDSSFNFGLAETLINSVKTEKDSGTAFTLERTYNLYSKISE
SHFTDAIFLTNHDQNRVMSQLDGNLDHAKMAAALLLTLPGNPFIYYGEEIGMLGVKPDEG
IREPMRWMTADQGEGQTTWEVGSNNADDVSINVESQTNDSSSLLKRYRELIALRNEVPAL
RDGGIRDYTSGNVGVMAYERITTKDQVLVVHNLTGDEQIITLHPNVEGISYTKIQKTTAD
KVTLNSDQLTLPPYSTVIVK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atcaccaaaaaacacacaataaacggacttttgagtcttagcttaactgcctttctgcta
tccggttgttcaggaaataataacaatatcccttcctctgcctccccttttccatcgcca
aaagcaaatactgttcaggatactacaacacctcccgctgcaaaaacgataactactgac
gaacaaccctcaacggtttattatgagatttttgttcgttcattctatgactctgacggg
gatggcatcggtgacctcaaagggattaccaaaaaattagattacttaaatgacggaaat
cctgacaccacagacgatctggggatcggagggatttggcttatgcctatcaacccttca
ccaagctatcatggttacgatgtgactgattatcgtgcaatcaatccagattatgggacg
attgaggatttacaggagctcgttacggaggcgcataaacgtgggattaaagtaattatg
gatttggtcgtgaatcacacctccaaagaacatccttggttcgtagattccgctaaaaat
aaggacagcaaatatcgcgactggtacatatgggctgaagatcaaggacgtcctgcgaat
ggagccagtgccgctggtagtggcaatgcatggcactctttactgggtagtcattatcta
ggtggcttttgggaaggcatgcctgatctaaattttgatcatacggaagttcgtaatgaa
atgaaggatatcggcaagttttggctggaacaaggggttgatggattccgtttagacgct
gctaaacatatttacgaagaccttctaaccgacaaaagccaagccacaacccataaaaat
gtattttggtggcaggatttccgcaaagcgatgaatgaagtgaatcctcaagcttatatt
gttggtgaagtatgggagaattctgcagtcaccgtagggacttatttggatcaagccttt
gactccagctttaactttggtttagcagagactcttattaattccgtgaaaactgaaaaa
gacagcgggactgcctttacgctggaacgtacgtataatctgtactccaaaatatctgag
agccattttaccgatgcgatttttttgacaaatcatgatcaaaacagagtcatgagtcaa
ttagacggcaatctggatcatgcaaaaatggcagcagccctgctgttaaccttgcctgga
aatccttttatttattatggtgaagaaataggaatgcttggtgtaaaaccagatgaagga
attcgtgagcccatgagatggatgacagcggatcagggtgaggggcagactacttgggag
gtcggcagcaataacgctgatgatgttagcattaatgtcgaaagccagactaacgacagc
agctcactgcttaaaagataccgcgaactcattgcgttaagaaacgaagtccctgcgctc
cgtgatggcggaattcgagactacacttctggcaatgtaggggtaatggcctacgaacgt
ataacaacaaaggatcaagtcctcgttgttcataacctaactggagatgaacaaatcatt
acgcttcatccaaatgtcgaaggtatctcttacaccaagatccaaaagacaactgctgac
aaagtgaccttaaattcagatcagcttactcttcctccctattcaacggttattgtgaag
tag
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