Paenibacillus odorifer: PODO_24590
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Entry
PODO_24590 CDS
T03326
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PODO_24590 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pod01007
]
PODO_24590 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pod03016
]
PODO_24590 (valS)
Enzymes [BR:
pod01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PODO_24590 (valS)
Amino acid related enzymes [BR:
pod01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PODO_24590 (valS)
Transfer RNA biogenesis [BR:
pod03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PODO_24590 (valS)
Prokaryotic type
PODO_24590 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
TMCO5
tRNA-synt_1f
tRNA-synt_1b
DASH_Spc19
LacAB_rpiB
ABC_tran_CTD
DUF5595
Motif
Other DBs
NCBI-ProteinID:
AIQ76168
LinkDB
All DBs
Position
complement(5453851..5456487)
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AA seq
878 aa
AA seq
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MPTTYDPKAAEQKWYSYWTEGGYFRAGQRPDAQAYSIVIPPPNVTGMLHIGHALDFTLQD
ILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLREQGISRHDLGREKFLEQVWDWKDKY
ANTIHEQWAKMGLSLDYSRERFTLDEGLSKGVREVFVKLYNKGLIYRGKRIINWDPAART
ALSDIEVEYKEVNGHLYHLRYPLKDGSGHITVATTRPETMLGDTAVAVHPEDDRYKDLIG
KTLILPIIGREIPIIADEYVDKEFGSGAVKITPAHDPNDFEVGQRHNLPQINVMDESGTM
NEEAGPYQGQDRSECRKAITADLKEQGVLISIEDHVHQVGHSERSGAVVEPYLSTQWFVK
MQPLAEAAINAQKDGNGVNFVPERFERTYLNWIENVRDWCISRQLWWGHRIPAWYSESTG
ELVVANDEEEARRISGLTDLKQDEDVLDTWFSSNLWPFATLGWPNEDSADFKRYYPNDVL
VTGYDIIYFWVARMIFSALEFTGEKPFSDVLMHGLVRDAEGQKMSKSLGNGVDPLEVIEK
YGADAMRYMISTGSTAGQDLRFRWEKVEQARNFANKIWNASRFALMNLEGVSFENIDITG
ELSTADRWILHRLNETSREITRLIDSYEFGETGRQLYNFIWDDLCDWYIEFAKLSLYGTD
AAAKAKTQSVLAYVLDRTMRLIHPFMPFISEEIWQHLPHEGETITLAAWPEYDAALENPQ
AVAEMNLLMDVIRAVRNIRAEVNVPMSKKVELIIKASNEETLSIITRNDNYIGRFCNTSS
FEAGLNPETPDKVMSAVVTGAELLLPLSGLIDIEQEIARLEKEVQTLNSEVERVEKKLSN
QGFVAKAPAKVIEEEQAKQADYSAKREKVLARIAELRG
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacgtatgatccgaaggcagcagaacagaaatggtattcctactggacagag
ggcggatatttccgtgcaggccagcgtccggatgctcaagcctatagcattgtgatcccg
ccgccaaacgtaacaggaatgctgcacatcgggcatgcgctcgatttcacattacaggat
atcctgattcgtaccaaacggatgcagggcttcgatacgctttggttgccaggtacggac
cacgcaggtattgcaacacaaacgaaggtagagcagaagctgcgcgagcaggggatttct
agacatgacctcggacgtgagaagttcctggagcaggtgtgggattggaaagacaaatac
gcaaacaccattcatgagcagtgggctaaaatgggactttctcttgactactcccgcgag
cgttttaccctcgatgagggtttgtcgaagggagttcgcgaggtatttgttaagctttat
aataaaggcttgatctaccgcggtaaacgtatcatcaactgggacccggcggctcgtacg
gcgttgtcggatatcgaggttgaatataaggaagttaacggtcatctgtaccatctgcgt
tacccacttaaagatggcagcggacatatcactgtagcgaccacacgtccggagacgatg
ttgggtgatacggcagttgctgttcatcctgaggatgatcgttataaagatctgattggc
aaaacgctgatcctgccgattatcggccgggagattccaattatcgctgacgagtatgta
gataaagagtttggcagcggtgcggttaagatcacgccagctcatgatccaaatgacttc
gaggtaggtcaacgtcataatctgccgcagatcaacgtaatggatgagagcggcacaatg
aacgaagaagcaggaccttaccaaggtcaagaccggagtgaatgccgtaaggccatcacg
gcggatctgaaggagcaaggcgttctgatctctattgaagatcatgtgcatcaagttgga
cacagtgaacgttcaggagctgttgttgagccgtacctgtccacacaatggttcgtgaag
atgcagccgctcgccgaagctgccatcaatgcacagaaggatggtaatggggttaacttt
gtacctgaacggttcgaaagaacctacctgaactggattgaaaacgtacgcgactggtgt
atttcccgtcagctttggtggggacatcgtattccggcttggtattctgaatctaccggt
gagctggttgtggcgaatgatgaggaagaagcgcgccggatcagcggcctaaccgacttg
aaacaggacgaggatgttctggatacttggtttagctccaacctctggccgtttgcaacc
ctaggctggccgaatgaagacagcgcagatttcaaacgttactatccgaacgatgtgctc
gtaacgggctatgatattatttatttctgggtagcgcggatgatcttctcggcactggaa
ttcacgggagagaaaccattctccgacgtattgatgcatggtttggtacgggatgctgaa
ggacaaaaaatgtccaagtcactcggcaacggcgtagatccgcttgaggttatcgagaag
tacggggcagatgctatgcgttatatgatttctaccggcagcacagcgggtcaggattta
cgcttccgctgggaaaaggtagagcaggcgcgtaatttcgctaataagatctggaatgcg
tcacgcttcgcccttatgaatcttgaaggagttagcttcgagaatattgacattactggt
gagctaagtacggctgaccgttggattttgcaccgcctgaacgaaacttctcgtgaaatt
acgcgtctaattgactcgtacgagttcggcgagaccggccgccagctgtacaacttcatt
tgggacgatttgtgtgactggtatattgagttcgcgaagctgtcgctttacggaacggat
gccgcagccaaagcgaagacacagtccgtacttgcttatgtactcgaccgcacgatgcgc
ttgattcatccgtttatgccgtttatttcggaggaaatctggcagcatctgccgcatgaa
ggagagacaattactctggctgcatggcctgagtatgatgctgctctggagaacccgcaa
gcggtagcggaaatgaacctgctgatggatgtaatccgggcagttcgtaatatccgtgct
gaagtgaacgtaccgatgagcaagaaggttgaattgattattaaagcgagcaatgaagaa
acgctgagcatcattactcgtaacgacaactacattggacgtttctgcaatacctcttct
ttcgaagctggtctgaatccggaaacgccagacaaggtaatgtccgctgtagtaacggga
gcggaactgcttctgcctttgtcggggctgattgatattgaacaagaaatcgctcgtctg
gaaaaagaagtgcagacgctgaacagcgaagtagaacgcgtagagaaaaagttgagcaat
cagggcttcgtagccaaagctcccgcaaaagttatcgaagaggagcaggcgaagcaggcg
gattactccgccaaacgtgagaaagtacttgcccgcatagcagagctgagaggataa
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