Polaromonas sp. JS666: Bpro_4793
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Entry
Bpro_4793 CDS
T00343
Name
(GenBank) RNA polymerase, sigma subunit, ECF family
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pol
Polaromonas sp. JS666
Brite
KEGG Orthology (KO) [BR:
pol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pol03021
]
Bpro_4793
Transcription machinery [BR:
pol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bpro_4793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_16
Motif
Other DBs
NCBI-ProteinID:
ABE46672
UniProt:
Q121X0
LinkDB
All DBs
Position
5079517..5080176
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AA seq
219 aa
AA seq
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MSSKTRRPGPTLSLVPEARDPAAPDRGATAPDTRADGRLDWSISMASAQAGDRDAYRRLL
EAVTPYLRALAARHIGNRSDVEDTVQDILLTIHTVRHTYDPARPFGPWLVTIANRRIIDV
LRRQGRCSAHEIPVEPEHETLSASEANLQEEAVSARMLRDAVECLPAGQRDAIRMLKLEE
MSLLEASAASGISVASLKVATHRALKRLRDVIEKPGNRT
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaaaactcggcggcccggccctaccctgagccttgtaccggaggcccgggat
ccagccgcgcccgaccgtggcgccacggcgccggatacccgcgccgacggcaggctggat
tggtccatctccatggccagtgcacaagcgggcgatcgtgatgcctaccggcgcctgctc
gaagcggtcacgccctatttgcgggcgctcgcggcccgccacatcggaaatcgaagtgac
gtcgaggatacggttcaggatattctgctgaccatccacacggtgcgccacacgtacgac
ccggctcgcccgtttggcccctggctggtgacgattgccaaccggcgcatcatcgacgtg
ctgcggcgacagggacgttgcagcgcgcatgaaataccggttgagcctgaacatgaaacc
ttgtcggcctctgaagcgaacttacaggaagaggctgtaagcgcccgcatgctgcgcgac
gcagtggagtgcctgccagccggacaacgggatgccatacgaatgctgaaacttgaagag
atgtcgttgctggaagcatctgcggccagcggaatatcggtcgcctcgctgaaagtggca
acgcaccgggccttgaagaggctgcgcgacgttatcgaaaaaccggggaacaggacatga
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