Pongo abelii (Sumatran orangutan): 100172047
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Entry
100172047 CDS
T01416
Symbol
TRIM39
Name
(RefSeq) tripartite motif-containing protein 39
KO
K12015
tripartite motif-containing protein 39 [EC:
2.3.2.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pon04121
]
100172047 (TRIM39)
Enzymes [BR:
pon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100172047 (TRIM39)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100172047 (TRIM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
zf-rbx1
zf-RING_10
Sina_RING
zf-ANAPC11
Prok-RING_4
zf-Nse
U-box
Baculo_IE-1
TRAF3_RING
MCD_N
Motif
Other DBs
NCBI-GeneID:
100172047
NCBI-ProteinID:
NP_001125160
Ensembl:
ENSPPYG00000016404
UniProt:
Q5RD20
LinkDB
All DBs
Position
6:30308095..30324989
Genome browser
AA seq
488 aa
AA seq
DB search
MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL
ERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYE
DQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPG
ELKRLVESRRQQILREFGELHRRLDEEQQVLLSRLEEEEQDILQRPRENAAHLGDKRRDL
AHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFALRK
ILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRLTFYPCVLATEGFTS
GRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAVTTTPFTPLH
IKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLT
IRPPTDWE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacaagtctgttagaggctggggcctctgcagcctctacagctgcggctttg
gagaacttacaggtggaggcgagctgctctgtgtgcctggagtatctgaaggaacctgtc
atcattgagtgtgggcacaacttctgcaaagcttgcatcacccgctggtgggaggaccta
gagagggacttcccttgtcctgtctgtcgaaagacatcccgctaccgcagtctccgacct
aatcggcaactaggcagtatggtggaaattgccaagcagctccaggccgtcaagcggaag
atccgggatgagagcctttgcccccaacaccatgaggccctcagccttttctgttatgag
gaccaggaggctgtatgcttgatatgtgcaatttcccacacccaccgggcccacaccgtt
gtgccgctggacgacgctacacaggagtacaaggaaaaactgcagaagtgtctggagccc
ctggaacagaagctgcaggagatcactcgctgcaagtcctctgaggagaagaagcctggt
gagctcaagagactagtggaaagtcgccgacagcagatcttaagggagtttggagagctt
cataggcggctggatgaagagcagcaggtgttgctttcacgactggaagaagaggaacag
gacattctgcagcgaccccgagaaaatgctgctcaccttggggacaagcgccgggacctg
gcccacttggctgctgaggtggagggcaagtgcttacagtcaggcttcgagatgcttaag
gatgtcaaaagtaccctggaaaaatgtgaaaaggtgaagaccatggaggtgacttcagta
tccatagagctggaaaagaacttcagcaatttcccccgacagtactttgccctaaggaaa
atccttaaacagctaattgcggatgtgaccctggaccctgagacagctcatcctaaccta
gtcctgtcagaggatcgtaagagtgtcaagttcgtggagacaagactacgggatctccct
gacacaccaaggcgtctcaccttctacccttgcgtcctggctactgagggtttcacctca
ggtcgacactactgggaggtggaggtgggcgacaagacccactgggcagtgggtgtatgc
cgggactccgtgagccgaaagggcgagttgactccactccctgagactggctactggcgg
gtgcggctatggaatggggacaaatatgcagtcaccaccacaccttttacccctttgcac
atcaaggtgaaacccaagcgggtaggcatcttcctagactatgaggccggcacactgtct
ttctacaatgtcacagaccgctctcatatctacaccttcactgatacttttactgagaaa
ctttggcccctcttctacccaggcatccgggctggacggaagaatgctgcaccacttacc
atcaggcccccaacagattgggagtga
DBGET
integrated database retrieval system
