Pongo abelii (Sumatran orangutan): 100173968
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Entry
100173968 CDS
T01416
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100173968 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pon03041
]
100173968 (DHX8)
Enzymes [BR:
pon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100173968 (DHX8)
Spliceosome [BR:
pon03041
]
Complex C
Other components
Step II factors
100173968 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100173968
NCBI-ProteinID:
NP_001126950
Ensembl:
ENSPPYG00000008357
UniProt:
Q5R4K2
LinkDB
All DBs
Position
17:51033526..51077437
Genome browser
AA seq
1127 aa
AA seq
DB search
MRPPAKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTMLDEDDVKVAVDVLKELEA
LMPSAAGQEKQRDAEHRTKKKKRSRSRDRNRDRDRGRERNRDRDHKRRHRSRSRSRSRTR
ERNKVKSRYRSRSRSQSPPKDRKDRDKYGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVT
SIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSL
SMKDVDQETGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTR
ISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHT
KQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPL
PDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQ
LVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEE
FGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDSDLTQYAIIMLDEAHERTIH
TDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPE
TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY
SALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQ
LVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLK
AMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML
IMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK
NNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFR
NAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWL
VEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctccagcgaagccttccactagcaaagatccagttgttaaacctaaaacagaa
aaagaaaagctgaaggaactcttcccagtcctttgccaaccggacaacccttctgttcgg
accatgttggatgaagatgatgtgaaagttgctgtggatgtcctgaaagaactggaagct
ttaatgcccagcgcagcaggccaggagaagcaaagagatgctgaacaccggacaaagaag
aagaagcggagtcgaagccgagatcgaaaccgagatcgagacagaggtagggaacgaaac
cgagatagagaccacaagcggagacaccgatctcgctctcgatcacgttccaggacccgg
gagaggaataaagtgaagtctagatatcggtccaggagcaggagtcagagtccccccaaa
gaccggaaggaccgggacaaatatggagagcggaatctggatagatggcgggataagcat
gtggaccgccctcctccagaagagcccaccattggtgacatttataatggcaaagttacc
agcatcatgcagtttggttgctttgtgcagctggaaggactaaggaagcggtgggaaggc
ctggtgcacatctctgagctccggcgggagggtcgtgtggccaatgtagctgatgtggtg
agcaaaggccagagggtcaaagtcaaagtgctgtccttcactgggaccaagaccagcctg
agcatgaaggatgtggatcaagagactggagaagatctaaacccaaatagacggcgaaat
cttgtcggggagaccaatgaggagacctcaatgcggaatcctgatagacccactcacttg
tcccttgtcagtgctcctgaagtagaggacgactcactggaacgcaagcgcctcacccga
atctctgacccagagaagtgggagatcaaacagatgattgctgccaatgtcctttccaaa
gaagaatttccagactttgatgaagagactggcattctccctaaggtggatgatgaagaa
gatgaggaccttgagattgaattggttgaggaagagcctccattcctgagagggcacact
aagcaaagcatggacatgagccccattaaaatcgtcaagaacccagatggctcgctctcc
caagcagcaatgatgcagagtgccttggccaaagaaaggcgggaactcaaacaggcccag
cgggaagctgagatggattctattcccatgggacttaacaaacactgggttgaccctctc
cctgatgcggaaggcagacagattgctgccaacatgaggggtattgggatgatgcccaat
gatattcctgagtggaagaagcatgcctttgggggcaacaaagcctcttacggaaaaaag
acccagatgtcaatccttgagcagagggagagcctgcccatctacaaactgaaggagcag
ttggtccaggccgtccatgacaatcagatcctgattgtcattggtgagacaggatctgga
aagacaacacagatcacccagtacctggcggaagcaggctacacttccaggggcaagatt
gggtgtacccagcccagaagagtggcagctatgtcggtggccaaaagagtgtcagaggag
tttggttgttgcttaggccaagaggtgggctacaccattcgatttgaggactgcactagc
cctgaaacagtcatcaagtacatgacagatgggatgttgcttagagagtgcttgattgac
tctgacctcactcagtacgcgatcatcatgttggacgaggcgcatgagaggacaattcac
accgatgtgctctttggattgttgaaaaagacagttcagaaacggcaggacatgaagctg
attgtcacctcagccaccttggacgcagtgaagttttctcaatacttctatgaagctccc
attttcaccatcccaggtcgaacatatccagtggaaatactgtacacaaaggaacctgag
acagattatctggatgccagcctgattactgttatgcagatccatttaacagaaccacca
ggtgatatcctggtcttcctgactggtcaggaagaaattgatactgcttgtgagatcctg
tatgaaagaatgaaatccctgggacctgatgttccagagttaattatcctcccagtgtac
tctgctcttcccagtgagatgcagacccgaatctttgacccagctccaccaggcagcaga
aaggttgtgattgccaccaatatcgcagagacatcgctgactattgatggtatctactat
gtggtggacccaggattcgtgaagcagaaagtttacaattccaagacagggattgaccag
cttgtggtgacgcctatttctcaggctcaggcaaagcaacgagctggcagagctgggaga
acaggcccagggaagtgttacaggctgtacacagaacgtgcctaccgagatgaaatgctg
accaccaacgtgccggaaatccagagaaccaacttagcaagcacagtgctgtcactcaag
gccatgggtatcaatgatctgctgtcctttgatttcatggatgccccacctatggaaact
ttgatcacagccatggagcagctgtacacactgggggccctggatgacgagggcctgctc
actcgcttgggccgccggatggcagagttccctctggagccaatgctatgcaaaatgctc
atcatgtctgtgcatctgggctgcagtgaggaaatgctgaccattgtatccatgctgtct
gtgcagaatgtcttctataggcccaaggataaacaagcccttgcagatcagaagaaggcc
aaattccaccagactgaaggggaccacctcaccctgctagctgtgtacaactcctggaag
aacaacaagttctccaacccatggtgctatgagaactttatccaggctcgttccctgcgc
cgggcccaggacattcgcaagcagatgttaggcataatggacagacacaagctggatgtt
gtttcctgtggcaagtccacagtccgagtgcagaaggccatctgcagtgggttcttccgt
aatgctgccaagaaagacccgcaggagggttaccggacactgatcgaccagcaggtggtc
tatatccatccttccagtgccctcttcaacagacagccagaatgggtggtgtaccatgag
ctggtgctgaccaccaaggaatacatgcgtgaagttaccaccatcgaccctcggtggctt
gtggagtttgccccagccttcttcaaggtctcagacccaactaagctaagcaaacagaag
aagcaacagcgtcttgaacccttgtacaaccgctatgaggaacccaacgcctggagaata
tctcgagccttccgacggcgctga
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integrated database retrieval system
