Pongo abelii (Sumatran orangutan): 100444077
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Entry
100444077 CDS
T01416
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04151
PI3K-Akt signaling pathway
pon04510
Focal adhesion
pon04512
ECM-receptor interaction
pon04820
Cytoskeleton in muscle cells
pon04926
Relaxin signaling pathway
pon04933
AGE-RAGE signaling pathway in diabetic complications
pon04974
Protein digestion and absorption
pon05146
Amoebiasis
pon05165
Human papillomavirus infection
pon05200
Pathways in cancer
pon05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100444077 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100444077 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100444077 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100444077 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100444077 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
100444077 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100444077 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
100444077 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100444077 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
100444077 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100444077 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pon04147
]
100444077 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
pon00536
]
100444077 (COL4A3)
Exosome [BR:
pon04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100444077 (COL4A3)
Glycosaminoglycan binding proteins [BR:
pon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100444077 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100444077
NCBI-ProteinID:
XP_024098890
Ensembl:
ENSPPYG00000013237
LinkDB
All DBs
Position
2B:114436709..114584714
Genome browser
AA seq
1670 aa
AA seq
DB search
MSPRTAPRPQVLLLPLLLVLLAAAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGSP
GQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGITGLPGFSGSPGLPGTPGNTGPYGLV
GVPGCNGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKGEDIELDAKGDPGLPGAPG
PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGPQGKPG
KDGVPGFPGSEGVKGNRGFPGITGEDGIKGQKGDIGLPGFRGPTEYYDTHQEKGDEGTPG
PPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGLPGKDAMGTPGSP
GCPGSPGLPGSPGPPGPPGGIVFRKGPPGDRGLPGYLGSPGIPGVDGPKGEPGLLCTQCP
YIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEK
GETLQPEGQVGAPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGD
PGSPGSPGPTGPAGPPSYGPQGEPGPQGTQGAPGAPGPPGEAGPRGELSVSTPVPGLPGP
PGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSL
GCPGKMGEPGLPGKPGLPGTKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG
TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRIGKTGSKGD
PGIPGLDRSGFPGETGSPGMPGHQGEMGPPGQKGYPGNPGILGPPGEDGVIGMMGFPGAI
GPPGPPGNPGMPGQRGSPGIPGVKGHRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLK
GFTGNPGEKGNRGIPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGELGLRGIPGSMGNR
GMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMG
KKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGFLGPPGIRGPPG
LPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLGAPPGPRGNPGAQGAKGDRGAPGFP
GLPGRKGVMGDAGPRGPTGIEGFPGPPGLPGAMIPGQKGNHGPPGSRGSPGEPGPPGPPG
SHVIGIKGDKGSMGHPGPKGPPGTVGDMGPPGHLGAPGTPGLPGLRGDPGFQGFPGVTGE
KGNPGFLGSIGPPGPIGPKGPPGIRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGP
PGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEPGPPGSDGLPGLKGKRGDSGSPAT
WTTRGFVFTRHSQTTAIPSCPEGTVPLYSGFSFLFVQGNQRAHGQDLGTLGSCLQRFTTM
PFLFCNVNDVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPAIAIAV
HSQSTDIPPCPHGWISLWKGFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKRH
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccggacggcccccaggccgcaggtgctcctactgccgctcctgctggtgctc
ctggcggcggcgcccgcagccagcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatggggccaaaggggagaagggggagaaaggctttcctggaccccccggttctcct
ggccagaaaggattcacaggtcctgaaggcttacctggaccacagggacccaagggcttt
ccaggacttccaggactcacgggttccaaaggtgtaaggggaataactggattgccagga
ttttccggttctcctggacttccaggcaccccaggcaatactgggccttatggacttgtc
ggtgtaccaggatgcaatggttctaagggtgagcaggggtttccaggactcccagggaca
ctgggctacccagggatcccgggtgctgctggtttgaaaggacaaaagggtgctcctgct
aaaggagaagatatagaacttgatgcaaaaggcgaccccgggttgccaggggctccagga
ccccagggtttgccaggccctccaggttttcctgggcctgttggcccacctggtcctccg
ggattctttggctttccaggagccatgggacctagaggacctaagggtcacatgggtgaa
agagtgataggacataaaggagagcggggtgtgaaagggttaacaggacccccgggacca
ccaggaacagttattgtgaccctaactggcccagataacagaacggacctcaagggggaa
aagggagacaagggagcaatgggcgagcctggacctcctggaccctcaggactgcctgga
gaatcatatggatctgaaaagggtgctcctggagaccctggcccacagggaaaacccgga
aaagatggtgttcctggcttccctggaagtgagggagtcaagggcaacaggggtttccct
gggataacgggtgaagatggcattaagggacagaaaggggacattggccttccaggattt
cgtggtccaacagaatattatgacacacaccaggaaaagggagatgaaggcactccaggc
ccaccagggcccagaggagctcgtggcccacaaggtcccagtggtccccccggagttcct
ggaagtcctggatcttcaaggcctggcctcagaggagcccctggatggccaggcttgaaa
ggaagtaaaggggaacgaggcctcccaggaaaggatgccatggggactcctgggtcccca
ggttgtcctggttcaccaggccttccaggatcaccgggacctccaggaccaccaggtggt
attgtttttcgcaagggtccacctggagatcgtggactgccaggctatctagggtctcca
ggaatcccaggagttgacgggcccaaaggagaaccaggcctcctgtgtacacagtgccct
tatatcccagggcctcccggtctcccaggattgccagggttacatggtgtaaaaggaatc
ccaggaagacaaggtgcagctggcttgaaaggaagcccagggtccccaggaaatacaggt
cttccaggatttccaggtttcccaggtgcccagggtgacccaggacttaaaggagaaaaa
ggtgaaacacttcagcctgaggggcaagtgggtgccccaggtgacccggggctcagaggc
caacctgggagaaagggcttggatggaattcctggaactccgggagtgaaaggattacca
ggacctaaaggcgaactggctctgagtggtgagaagggggaccaaggtcctccaggggat
cctggctcccctgggtccccaggacctacaggaccagctggaccacctagctacggaccc
caaggagaacctggtcctcagggcacgcaaggagctcctggagcccctggaccacccgga
gaagccggccctaggggagagctcagtgtttcaacaccagttccaggcctaccaggacct
ccagggccccctggccatcctggcccccaaggtccacctggtatccctggatccctgggg
aaatgtggagatcctggtcttccagggcctgatggtgaaccaggaattccaggaattgga
tttcctgggcctcctggacctaaaggagaccaaggttttccgggtacaaaaggatcactg
ggttgtcctggaaaaatgggagagcctgggttacctggaaagccaggcctcccaggaacc
aagggagaaccagcagtagccatgcctggaggaccaggaacaccaggttttccaggagaa
agaggcaattctggggaacatggagaaattggactccctggacttccaggtctccctgga
actccaggaaatgaagggcttgatggaccacgaggagatccagggcagcctggaccacct
ggagaacaaggacccccaggaaggtgcatagagggtcccaggggagcccaaggacttcca
ggcttaaatggattgaaagggcaacaaggcagaataggtaaaacagggtcaaagggagac
ccaggaattccaggcttggatagatcaggatttcctggagaaactggatcaccaggaatg
ccaggtcatcaaggcgagatgggaccaccgggtcaaaaaggatatccaggaaatccggga
attttagggccaccaggtgaagatggagtgattgggatgatgggctttcctggagccatt
ggtcctccggggccccctgggaacccaggcatgccagggcagagggggagccctggaatt
ccaggagtaaaaggccatagaggaaccccaggagccaagggggaacaaggagataaagga
aatcccgggccttctgagatatcccacgtaataggggacaaaggagaaccaggtctcaaa
ggattcacaggaaatccaggtgagaaaggaaacagaggcattccagggatgccaggttta
aaaggcctcaaaggactacctggaccagcaggaccaccaggccccagaggagatttgggc
agcactgggaatcctggagaactaggactgcgtggtataccaggaagcatggggaacagg
ggcatgccaggttctaaaggaaaaaggggaactctgggattcccaggtcgagcaggaaga
ccaggcctcccaggtattcacggtctccagggagataagggagagccaggttattcagaa
ggtacaaggccaggaccaccgggaccaacgggggatccaggactgccgggtgatatggga
aagaaaggagaaatggggcaacctggcccacctggacatttggggcctgctggacctgag
ggagcccctggaagtcctggaagtcctggcctcccaggaaagccaggtcctcatggtgat
ttgggttttaaaggaatcaaaggcttcctgggccctccaggaatcagaggccctccaggt
cttccaggattcccaggatctcctggaccaatgggtataagaggtgaccaaggacgtgat
ggaattcctggtccagccggagaaaagggagaaacgggtttattgggggcccctccaggc
ccaagagggaaccctggtgctcaaggagccaaaggagacaggggagccccaggttttcct
ggcctcccaggcagaaaaggggtcatgggagatgctgggcctcgagggcccacaggcata
gaaggattcccagggccaccaggtctgcccggtgcaatgatccctggccagaaaggaaat
catggtccaccaggctcaagaggaagcccaggtgagcctggtccccctggacctccaggg
agtcacgtaataggcataaaaggagacaaagggtctatgggccaccctggcccgaaaggt
ccacctggaactgtaggagacatgggaccaccaggtcatctgggagcaccaggtactcca
ggtcttccaggacttagaggtgatcctggattccaggggtttccaggcgtgacaggagaa
aagggtaatcctggatttctaggatccattggacctccaggaccaattgggccaaaagga
ccacctggtatacgtggagaccctggcacacttaagattatctcccttccaggaagccca
gggccacctggcacacctggagaaccagggatgcagggagaacctgggccaccagggcca
cctggaaacctaggaccctgtgggccaagaggtaagccaggcaaggatggaaaaccagga
actcctggaccagctggagaaaaaggcaacaaaggttctaaaggagagccaggaccacct
ggatcagatggattgccaggtttgaaaggaaaacgtggagacagtggatcacctgcaacc
tggacaacgagaggctttgtcttcacccgacacagtcaaaccacagcaattccttcatgt
ccagaggggacagtgccactctacagcgggttttcttttctttttgtacaaggaaatcaa
cgagcccacggacaagaccttggaactcttggcagctgcctgcagcgatttaccacaatg
ccattcttattctgcaatgtcaatgatgtatgtaatttcgcatctcgaaatgattattca
tactggctgtcaacaccagctctgatgccaatggacatggctcccattactggcagggcc
cttgagccttacataagcagatgcactgtttgtgaaggtcctgcgatcgccatagccgtt
cacagccaaagcactgacattcctccatgtcctcacggctggatttctctctggaaagga
ttttcattcatcatgttcacaagtgcaggttctgagggcaccgggcaagcactggcctcc
cctggctcctgcctggaagaattccgagccagcccatttctagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggctggcttcattaaacccagaaaga
atgttcagaaagcctattccatcaactgtgaaagctggggaattagaaaaaataataagt
cgctgtcaggtgtgcatgaagaaaagacactga
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integrated database retrieval system