Pongo abelii (Sumatran orangutan): 100446303
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Entry
100446303 CDS
T01416
Gene name
TRIM71
Definition
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100446303 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100446303 (TRIM71)
04121 Ubiquitin system [BR:
pon04121
]
100446303 (TRIM71)
Enzymes [BR:
pon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100446303 (TRIM71)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100446303 (TRIM71)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100446303 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-RING_5
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100446303
NCBI-ProteinID:
XP_003776339
Ensembl:
ENSPPYG00000014036
LinkDB
All DBs
Position
3
AA seq
868 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGTPAGAGGHSNHRHHAHHAHPRASASAPPLPQAPQPPAPSRSA
PGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIER
GPPGPGAAAAAQQLGLGPPFPGPPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRE
CTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVV
QSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQ
VLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSS
GAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFAAEV
SDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEG
DSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVA
CDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTR
NHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQS
ARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQ
MDRPSGIAITPDGMIVVVDFGNNRILVF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgatttccagatctgcttgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtccgcgtcgtcgtcgtcctcgcagacgtccacg
tcgtcggggggcggcggcgggggccctggggcggcggcgcgccgcctacacgtcctgccc
tgcctgcacgccttctgccgcccctgcctcgaggcgcaccggctgccggcggcgggcggc
ggcgcgccgggagagccgctcaagctgcgctgccccgtgtgcgaccagaaagtagtgcta
gccgaggcggcgggcatggacgcgctgccttcgtccgccttcctgcttagcaacctgctt
gacgcggtggtggccactgccgacgagccgccgcccaagaacgggcgcgccggcactccg
gcgggagcgggcggccacagcaaccaccggcaccacgctcaccacgcgcacccgcgcgcg
tccgcctccgcgccgccactcccgcaggcgccgcagccgcccgcgccttcccgctcggca
cccggcggcccggccgcttccccgtcggcgctgctgctccgccggcctcacggctgcagc
tcgtgcgatgagggcaacgcagcttcttcgcgctgcctcgactgccaggagcacctgtgc
gacaactgcgtccgagcgcaccagcgcgtgcgcctcaccaaggaccactacattgagcgc
ggcccgccgggtcccggtgccgcggcagcggcgcagcagctcgggctcgggccgcccttt
cccggcccgcccttctccatcctctcagtgtttcccgagcgcctcggcttctgccagcac
cacgacgacgaggtgctgcacctgtactgtgacacttgctctgtacccatctgtcgtgag
tgcacaatgggccggcacggaggccacagcttcatctacctccaggaggcgctgcaggac
tcgcgggcactcaccatccagctgctggcagatgcccagcagggacgacaggcaatccag
ctgagcatcgagcaggcccagacggtggcggaacaggtggagatgaaggcgaaggttgta
cagtcggaggtcaaagccgtgactgcgaggcataagaaagctctggaggaacgcgagtgt
gagctgctgtggaaggtagaaaagatccgccaggtgaaagccaagtctctgtacctgcag
gtggagaagctgcgacaaaacctcaacaagcttgagagcaccatcagtgccgtgcagcag
gtcctggaggagggtagagcgctagacatcctactggcccgagaccggatgctggcccag
gtgcaggagctgaagaccgtgcggagcctcctgcagccccaggaagatgaccgagtcatg
ttcacaccccccgatcaggcactgtaccttgccatcaagtcttttggctttgttagcagc
ggggcctttgcaccactcaccaaggccacgggcgatggcctcaagcgcgccctccagggt
aaggtggcctccttcacggtcattggttatgaccacgatggtgagccccgcctctcagga
ggtgacctgatgtcggctgtggtcctgggccctgatggcaacctgtttgctgcagaggtg
agtgatcagcagaatgggacatatgtggtgagttaccggccccagctggagggtgagcat
ctggtatctgtgacactgtgcaaccagcacattgagaacagccctttcaaggtggtggtc
aagtcaggccgcagctacgtgggcattgggctcccgggcctgagcttcggcagtgagggt
gacagcgatggcaagctctgccgcccttggggtgtgagtgtagacaaggagggctacatc
atcgtcgccgaccgcagcaacaaccgcatccaggtgttcaagccctgcggtgccttccac
cacaaatttggcaccctgggctcccggcctgggcagttcgaccgaccagccggcgtggcc
tgtgacgcctcacgcaggatcgtggtggctgacaaggacaatcatcgcatccagatcttc
accttcgagggccagttcctcctcaagtttggtgagaaaggaaccaagaatgggcagttc
aattacccttgggatgtggcggtgaattctgagggcaagatcctggtctcagacacgagg
aaccaccggatccagctgtttgggcctgatggtgtcttcctaaataagtatggcttcgag
ggggctctctggaagcactttgactccccacggggtgtggccttcaaccatgagggccac
ttggtggtcaccgacttcaacaaccaccggctcctggttattcaccccgactgccagtcg
gcacgctttctgggctcggagggcacgggcaatgggcagttcctgcgcccacaaggggta
gctgtggaccaggaagggcgcatcattgtggcggattccaggaaccatcgggtacagatg
tttgaatccaacggcagcttcctgtgcaagtttggtgctcaaggcagcggctttgggcag
atggaccgcccttccggcatcgccatcacccccgatggaatgatcgttgtggtagacttt
ggcaacaatcgaatcctcgtcttctaa
DBGET
integrated database retrieval system
