KEGG   Pongo abelii (Sumatran orangutan): 100459509Help
Entry
100459509         CDS       T01416                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon05034  Alcoholism
pon05165  Human papillomavirus infection
pon05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:pon00001]
 09160 Human Diseases
  09161 Cancers
   05203 Viral carcinogenesis
    100459509 (HDAC6)
  09164 Substance dependence
   05034 Alcoholism
    100459509 (HDAC6)
  09167 Infectious diseases
   05165 Human papillomavirus infection
    100459509 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatase and associated proteins [BR:pon01009]
    100459509 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA Biogenesis [BR:pon03019]
    100459509 (HDAC6)
   04131 Membrane trafficking [BR:pon04131]
    100459509 (HDAC6)
   03036 Chromosome and associated proteins [BR:pon03036]
    100459509 (HDAC6)
Enzymes [BR:pon01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100459509 (HDAC6)
Protein phosphatases and associated proteins [BR:pon01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100459509 (HDAC6)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100459509 (HDAC6)
Membrane trafficking [BR:pon04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    100459509 (HDAC6)
Chromosome and associated proteins [BR:pon03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     100459509 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP
Motif
Other DBs
NCBI-GeneID: 100459509
NCBI-ProteinID: XP_024096305
Ensembl: ENSPPYG00000020320
LinkDB All DBs
Position
X
AA seq 1214 aa AA seqDB search
MTSTGQDSTTTRQRRSRQNPQSPPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLG
QAMEEDLIVGLQGMDLNIEAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNS
YSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSA
QASVSCALEALEPFWEVLVRSTETVEGDNMEEDNVESEEEGPWEPPALPILTWPVLQSRT
GLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHS
AEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNG
AAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHMFE
DDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHR
LVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGHIILILEGG
YNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVED
REGPSSSKLVTKKAPQPAKPRLAERMTTREKKVLEAGMGKVTSASFGEESTPGQTKSETA
VVVLTQDQPSEAATGGATLAQTISEAAIGGAMLGQTTSEEAVGGATPDQTTSEETVGGAT
VDQTTSEDAVGGATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGGTELIQT
PLASSTDHQTPPTSPVQGTTPQIFPSTLIGSLRTLELGSESQGASESQAPGEENLLGEAA
GGQDMADSMLMQGSRGLTDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQE
NWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKNI
AHQNKFGEDMPHPH
NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt
atgacctcaaccggccaggattccaccacaaccaggcagcgaagaagtaggcagaacccc
cagtcgccccctcaggactccagtgtcacttcgaagcgaaatattaaaaagggagcagtt
ccccgctccatccccaatctagcggaggtaaagaagaaaggcaaaatgaagaagctcggc
caagcaatggaagaagatctaatcgtgggactgcaagggatggatctgaacattgaggct
gaagcactggctggcactggcttggtgttggatgagcagctaaatgaattccattgcctc
tgggatgacagcttcccggaaggccctgagcggctccatgccatcaaggagcaactgatc
caggagggcctcctagatcgctgcgtgtcctttcaggcccggtttgctgaaaaggaagag
ctgatgttggttcacagcctagaatatattgatctgatggaaacaacccagtacatgaat
gagggagaactccgtgtcctagcagacacctacgactcagtttatctgcatccgaactca
tactcctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtcctgggg
gctgagatccggaatggcatggccatcattaggcctcctggacatcatgcccagcacagt
cttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgctcaacag
aaacaccgcatccggagggtccttatcgtagattgggatgtgcatcatggtcaaggaaca
cagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctacgagcag
ggtaggttctggccccacctgaaggcctctaactggtccaccacaggtttcggccaaggc
caaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgactacatt
gctgctttcctgcacgtcctgctgccagtcgccctcgagttccagcctcagctggtcctg
gtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgccactccg
gcagggttcgcccagctaacccacttgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctataacctccgcgccctagctgaaggcgtcagtgcttcgctccac
acccttcttggagacccttgccccatgctggagtcacctggtgccccctgccggagtgcc
caggcttcagtttcctgtgctctggaagcccttgagcccttctgggaggttcttgtgaga
tcaactgagaccgtggagggggacaacatggaggaggacaatgtagagagcgaggaggaa
ggaccctgggagccccctgcgctcccaatcctgacatggccagtgctacagtctcgcaca
gggctggtctatgaccaaagtatgatgaatcactgcaacttgtgggacagccaccaccct
gaggtaccccagcgcatcttgcggatcatgtgccgtctggaggagctgggccttgccggg
cgctgcctcaccctgacaccgcgccctgccacagaggctgagctgctcacctgccacagt
gctgagtacgtgggtcatctccgggccacagagaaaatgaaaacccgggagctgcaccgt
gagagttccaactttgactccatctatatctgccccagtaccttcgcctgtgcacagctt
gccactggcgcagcctgccgcctggtagaggctgtgctctcaggagaggttctgaatgga
gctgctgtggtgcgtcccccaggacaccacgcggagcaggatgcagcttgcggtttttgc
tttttcaactctgtggctgtggctgctcgccatgcccaggctatcagtgggcgtgcccta
cgaatcctgattgtggattgggatgtccaccacggtaatggaactcagcacatgtttgag
gatgaccccagtgtgctatatgtgtccctgcaccgctatgatcatggcaccttcttcccc
atgggggatgagggtgccagcagccagatcggccgggctgcgggcacaggcttcaccgtc
aacgtggcatggaacgggccccgcatgggtgacgctgactacctagctgcctggcatcgc
ctggtgcttcccattgcctacgagtttaacccagaactggtgctggtctcagctggcttt
gatgctgcacggggggacccgctggggggctgccaggtgtcacctgagggttatgcccac
ctcacccacctgctgatgggccttgccagtggccacattatccttatcctagagggtggc
tataacctgacatccatctcagagtccatggctgcctgcactcgctccctccttggagac
ccgccacccctgctgaccctgccacggcccccactatcaggggccctggcctcaatcact
gagaccatccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtagaagac
agagagggaccctccagttctaagttggtcaccaagaaggcaccccaaccagccaaacct
aggttagctgagcggatgaccacacgagaaaagaaggttctggaagcaggcatggggaaa
gtcacctcggcatcatttggggaagagtccactccaggccagactaagtcagagacagct
gtggtggtcctcactcaggaccagccctcagaggcagccacagggggagccactctggcc
cagaccatttctgaggcagccattgggggagccatgctgggccagaccacctcagaggag
gctgtcgggggagccactccggaccagaccacctcagaggagactgtgggaggagccact
gtggaccagaccacctcagaggatgctgttgggggagccacgctgggccagactacctca
gaggaggctgtaggaggagctacactggcccagaccacctcggaggcagccatggaggga
gccacactggaccagactacgtcagaggaggctccagggggcaccgagctgatccaaact
cctctagcctcgagcacagaccaccagacccccccaacctcacctgtgcagggaactaca
ccccagatatttcccagtacactgattgggagtctcaggaccttggagctaggcagcgaa
tctcagggggcctcagaatctcaggccccaggagaggagaacctactaggagaggcagct
ggaggtcaggacatggctgattcgatgctgatgcagggatctaggggcctcactgatcag
gccatattttatgctgtgacaccactgccctggtgtccccatttggtggcagtatgcccc
atacctgcagcaggcctagacgtgacccaaccttgtggggactgtggaacaatccaagag
aattgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaatggccacatg
ctccaacaccatggaaattctggacacccgctggtcctcagctacatcgacctgtcagcc
tggtgttactactgtcaggcctatgtccaccaccaggctctcctagatgtgaagaacatc
gcccaccagaacaagtttggggaggatatgccccacccacactaa

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