Pongo abelii (Sumatran orangutan): 100460339
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Entry
100460339 CDS
T01416
Symbol
CLEC4M
Name
(RefSeq) LOW QUALITY PROTEIN: C-type lectin domain family 4 member M
KO
K06563
C-type lectin domain family 4 member L/M
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03260
Virion - Human immunodeficiency virus
pon03264
Virion - Flavivirus
pon04145
Phagosome
pon04625
C-type lectin receptor signaling pathway
pon05152
Tuberculosis
pon05162
Measles
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
100460339 (CLEC4M)
03264 Virion - Flavivirus
100460339 (CLEC4M)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100460339 (CLEC4M)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
100460339 (CLEC4M)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
100460339 (CLEC4M)
09171 Infectious disease: bacterial
05152 Tuberculosis
100460339 (CLEC4M)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100460339 (CLEC4M)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pon04054
]
100460339 (CLEC4M)
04090 CD molecules [BR:
pon04090
]
100460339 (CLEC4M)
04091 Lectins [BR:
pon04091
]
100460339 (CLEC4M)
Membrane trafficking [BR:
pon04131
]
Endocytosis
Phagocytosis
C-lectin receptors
100460339 (CLEC4M)
Pattern recognition receptors [BR:
pon04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
100460339 (CLEC4M)
CD molecules [BR:
pon04090
]
Proteins
100460339 (CLEC4M)
Lectins [BR:
pon04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
DC-SIGN subgroup
100460339 (CLEC4M)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
DUF2170
DUF2730
Occludin_ELL
DUF6779
Med4
NPV_P10
DIMCO_N
Tup_N
GIT1_C
Med10
Motif
Other DBs
NCBI-GeneID:
100460339
NCBI-ProteinID:
XP_003779093
Ensembl:
ENSPPYG00000009487
LinkDB
All DBs
Position
19:7714719..7720857
Genome browser
AA seq
307 aa
AA seq
DB search
MSDSKEPRVQQLDLLEEDPTTSGIRLFPRDFQFQQIHGHKSSTGCLGHGALVLQLLSFTL
LAGVLVAILVQVYKVPSSLSQEQSEQDTIYQNLTQIKAAVGELSEKSKLQEIYQELTQLK
AAVGELPEKSKLQEIYQELTQLKAALGELPDQSKQQQIYQELTDLKTAFERLCCHCPKDX
TFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVIIKSAEEQNFLQLQTLRSNRFSWMGLSD
LNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCNVDNYWICKKP
AACFRDE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactccaaggaaccaagggtgcagcagctggacctcctagaagaagatccaaca
accagtggcatcagactttttccaagagactttcaattccagcagatacatggccacaag
agctctacagggtgtcttggccatggtgccctggtgctgcaactcctctccttcacgctc
ttggctggggtcctggtggccatccttgtccaagtgtacaaggtccccagctccctaagt
caggaacaatccgagcaagacacaatctaccagaatctgacccagattaaagctgcagtg
ggtgagctctcagagaaatccaagctgcaggagatctaccaagagctgacccagctgaag
gctgcagtgggtgagttgccagagaaatccaagctgcaggagatctaccaggagctgacc
cagctgaaggctgcacttggtgaattgccagaccagtccaagcagcagcaaatctatcaa
gaactgaccgatttgaagactgcatttgaacgcctgtgctgccactgtcccaaggactag
acattcttccaaggaaactgttacttcatgtctaactcccagaggaactggcacgactct
gtcaccgcctgccaggaagtgagggcccagctcgtcataatcaaaagtgctgaggagcag
aacttcctacagctgcagactttgaggagtaaccgcttctcctggatgggactttcagac
ctaaatcaggaaggcacgtggcaatgggtggatggctcacctctgtcacccagcttccag
cggtactggaacagtggagaacccaacaatagcgggaatgaagactgtgcggaatttagt
ggcagtggctggaacgacaatcgatgtaacgttgacaattactggatctgcaaaaagccc
gcagcctgcttcagagatgaatag
DBGET
integrated database retrieval system
