Pongo abelii (Sumatran orangutan): 100461003
Help
Entry
100461003 CDS
T01416
Gene name
SHH
Definition
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04340
Hedgehog signaling pathway
pon04360
Axon guidance
pon05200
Pathways in cancer
pon05205
Proteoglycans in cancer
pon05217
Basal cell carcinoma
pon05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100461003 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100461003 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100461003 (SHH)
05205 Proteoglycans in cancer
100461003 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
100461003 (SHH)
05217 Basal cell carcinoma
100461003 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pon01002
]
100461003 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pon00536
]
100461003 (SHH)
Peptidases and inhibitors [BR:
pon01002
]
Cysteine peptidases
Family C46: hedgehog family
100461003 (SHH)
Glycosaminoglycan binding proteins [BR:
pon00536
]
Heparan sulfate / Heparin
Morphogens
100461003 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Motif
Other DBs
NCBI-GeneID:
100461003
NCBI-ProteinID:
XP_002818767
LinkDB
All DBs
Position
7
AA seq
465 aa
AA seq
DB search
MGEMLLLARCLLLVLVSSLLVCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSD
FLTFLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSAAGEPEASSGSGPPSGG
ALGPRALFASRVRPGQRVYVVAERDGDRRLLPAAVHSVTLREEAAGAYAPLTAQGTILIN
RVLASCYAVIEEHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVPLPA
PGAADAPGAGAPAGVHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagatgctgctgctggcgagatgtctgctgctagtcctcgtctcctcgctgctg
gtgtgctcgggactggcgtgcggaccgggcagggggttcgggaagaggaggcaccccaaa
aagctgacccctttagcctacaagcagtttatccccaatgtggccgagaagaccctaggc
gccagcggcaggtatgaagggaagatctccagaaactctgagcgatttaaggaactcacc
cccaattacaaccccgacatcatatttaaggatgaagaaaacaccggagcggacaggctg
atgactcagaggtgtaaagacaagttgaacgctttggccatctcggtgatgaaccagtgg
ccaggagtgaaactgcgggtaaccgagggctgggacgaagatggccaccactcagaggag
tctctgcactacgagggccgcgcagtggacatcaccacgtccgaccgcgaccgcagcaag
tacggcatgctggcccgcctggcggtggaggccggcttcgactgggtgtactacgagtcc
aaggcgcacatccactgctcggtgaaagcagagaactcggtggcggccaaatcgggaggc
tgcttcccgggctcggccacggtgcacctggagcagggcggcaccaagctggtgaaggac
ctgcgccccggggaccgcgtgctggcggcggacgaccagggccggctgctctacagcgac
ttcctcactttcctggaccgcgacgacggcgccaagaaggtcttctacgtgatcgagacg
cgggagccgcgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgcac
aacgactcggccgccggggagcccgaggcgtcctcaggctcggggccgccttccgggggc
gcactggggcctcgggcgctgttcgccagccgcgtccgcccgggccagcgcgtgtacgtg
gtggccgagcgcgacggggaccgccggctcctgcccgccgctgtgcacagcgtgacccta
cgcgaggaggccgcgggcgcctacgcgccgctcacggcccagggcaccatcctcatcaac
cgggtgctggcctcgtgctacgcggtcatcgaggagcacagctgggcgcaccgggccttc
gcgcccttccgcctggcgcacgcgctcctggctgcactggcgcccgcgcgcacggaccgc
ggcggggacagcggcggcggggaccgcgggggcggcggcggcagagtacccttgcccgcg
ccaggtgctgccgacgctccgggtgcgggggcccccgcgggcgtccactggtactcgcag
ctgctctaccaaataggcacctggctcctggacagcgaggccctgcacccgctgggcatg
gcggtcaagtccagctga
DBGET
integrated database retrieval system
