Polaromonas sp. Pch-P: F7R28_18740
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Entry
F7R28_18740 CDS
T06273
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
poo
Polaromonas sp. Pch-P
Brite
KEGG Orthology (KO) [BR:
poo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poo03032
]
F7R28_18740
03400 DNA repair and recombination proteins [BR:
poo03400
]
F7R28_18740
Enzymes [BR:
poo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F7R28_18740
DNA replication proteins [BR:
poo03032
]
Prokaryotic type
DNA Topoisomerases
F7R28_18740
DNA repair and recombination proteins [BR:
poo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F7R28_18740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QGJ20229
UniProt:
A0A5Q3HI46
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All DBs
Position
3995239..3996450
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AA seq
403 aa
AA seq
DB search
MPGARTTSSSAKVFSTKAPPILQGSGLVYVSDDMPGLTRLKSGKGFRYRNAGGQAIRDPD
EIRRIQKLAIPPAYTRVWICPKPNGHLQATGYDARGRKQYRYHADWQERRNDSKFERLQA
FGHALPRIRARVARDLAPRRNAPVSRSLVLATLVRLLDTTFVRVGNDEYARENGSYGLTT
LRNPHAGVRGKTLQLRFRGKSGVMQDLKVDDPKVAAVVRRCQQLPGQLLFQYESVEGEAT
ELRAVGSSDVNDYLAEITRSKNASPDSSDHFTAKDFRTWHGTVQALELTRLACSTSDDPK
AGGYSAKAVLQEVARLLGNTPAVCKKSYIHPAVMALGGSLAQDAGAMGELWPQLESGKKL
RRLYAAEHRLMGFLDKHQRALKTQARAAGKASGKAPKKSKPAG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcgcacgcaccacttcgtcttctgccaaagttttttccaccaaagcaccgccc
atcctgcagggcagcggccttgtgtatgtgagcgacgacatgcccgggctgacccggctt
aaaagcggcaagggctttcgttaccgcaacgccggcggccaggcgatcagggacccggac
gagatccgccgcatccagaagctggcgattccgccggcctatacgcgcgtgtggatctgc
cccaagccaaacggccacctgcaggccaccggctacgacgcgcgcggccgcaagcaatac
cgctaccacgccgactggcaggaaagacgcaacgacagcaagtttgagcggctgcaggcc
tttggccatgccctgccgcgcatacgcgcccgtgtggcacgcgacctggcgccgcgccgc
aatgcaccggtgagccgcagcctggtgctggccacgctggtgcgcctgctggacaccacc
tttgtgcgcgtcggcaacgacgagtacgcgcgcgagaacggctcctacggcctgaccacc
ttgcgcaacccgcacgccggcgtgcgcggcaaaacgctgcagctgcgctttcgtggcaaa
agcggcgtgatgcaagacctgaaggtggacgacccaaaagtcgcggccgtggtgcggcgc
tgccagcagttgccggggcagttgctgtttcagtatgagagcgtggaaggcgaagccacc
gaactccgtgccgtcggttcgagcgacgtcaacgactacctcgcggaaatcacccggagc
aaaaacgccagccctgacagcagcgatcacttcaccgccaaggatttccgcacctggcac
ggcaccgtgcaggcgctggaattgacgcggctggcttgcagcaccagcgacgaccccaag
gccggcggctacagcgccaaggcggtgctgcaggaagtcgcccgcctgctcggcaacacc
ccggccgtctgcaagaagtcctacatccacccggccgtgatggcgctgggcggcagcctg
gcgcaggacgcgggcgcgatgggcgagctgtggccgcagctggagtccggcaagaagctg
cgccggctgtatgcggccgaacaccggctgatgggctttcttgacaaacaccagcgcgca
ctgaaaacccaggcgcgggcggccggcaaggcttcgggcaaggcgccgaagaaatcgaaa
cccgccggctaa
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