Populus trichocarpa (black cottonwood): 18098330
Help
Entry
18098330 CDS
T01077
Name
(RefSeq) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00230
Purine metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
18098330
Enzymes [BR:
pop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
18098330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_C
GARS_N
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_2
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
18098330
NCBI-ProteinID:
XP_006385046
UniProt:
B9N0E9
LinkDB
All DBs
Position
4:complement(22954559..22959663)
Genome browser
AA seq
528 aa
AA seq
DB search
MSCATLSLPPSLKLLNSCFQPSNKKSCFLSSSFSSVSFVGPLTSYGNKSSWDSCHVIKGL
RSFPIVFKCVAQKSELSVSVGAGSNIASEKRLVVLVIGGGGREHALCYALQRSPSCDAVF
CAPGNAGISNSGNATCIPELDISDSSAVISFCRKWGVGLVVVGPEAPLVSGLANDLVKAG
IPTFGPSAEAAALEGSKNFMKNLCDKYKIPTAKYQTFTDPSSAKQYIEDQGAPIVIKADG
LAAGKGVIVAMTLEEAYEAVDSMLVKSVFGSAGCCVVVEEFLEGEEASFFALVDGENAIP
LESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQSVVMQTIIHPTVKGMAAEGCKFVG
VLYAGLMIEKKTGLPKLIEYNVRFGDPECQVLMVRLESDLAQVLLAASRGELSGVSLKWS
PGSAMVVVMASKGYPGSYEKGTVIQNLEEAENVAPTVKIFHAGTALNSDGNFIATGGRVL
GVTATGRDLEEARDRAYQAVEEINWPGGFYRRDIGWRALPQKQLAPKK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgctaccttaagcctaccaccttctctcaaacttctcaatagctgctttcag
ccttcaaacaagaaatcttgtttcctcagcagctcgttttcttcggtaagctttgtggga
cccttgacttcctatggtaacaaaagctcttgggactcatgccatgtaattaagggctta
agatcgtttcccatcgtcttcaaatgtgttgctcagaaatcagagctgtcggtttcagtt
ggtgctggcagcaatattgcttctgaaaagaggttggttgtgttggttattggtggaggg
ggaagagaacatgcactttgctatgccttgcagcgatctccctcctgtgatgcagtcttc
tgtgctcctggcaatgcagggatttctaactctggaaatgctacctgtattccagagctt
gacatctctgatagctcagcagtgatctccttttgccgcaaatggggtgttggactggtt
gttgtgggaccagaggcacctttggtttctggccttgcaaatgatttagtaaaagctgga
atccctacttttgggccatcagcagaagcagctgctttagaaggttcaaagaacttcatg
aaaaatttgtgcgacaaatataaaattcctactgctaagtaccaaacatttacagatcca
tcttctgcaaagcaatacattgaggaccagggagcacctattgtcataaaagcagatggc
ttggctgctggaaaaggagttattgttgccatgacactagaggaggcatatgaagctgtt
gattcaatgctcgtgaagagtgtttttggttctgcaggttgttgcgtagttgttgaagaa
tttctggaaggagaagaagcgtctttctttgccctggtggatggagagaatgctattcct
ctagaatctgctcaggaccataaaagagttggtgatggagacacaggtcccaatactggt
gggatgggggcatactctccagcaccagtattgacaaaagaacttcagtcagtggtcatg
caaactataattcacccaacagtcaagggaatggcagccgagggttgcaagtttgtaggt
gttttgtatgctgggctgatgattgagaagaagactggcttacctaagctaattgagtac
aatgtacgctttggcgaccctgagtgtcaggtgttgatggttcgcttggaatcggatcta
gcacaagtcctgcttgcagctagtagaggagagctaagtggagtgtccctgaaatggtct
ccagggtctgccatggtggtggttatggcaagcaaggggtaccctgggtcctatgaaaag
gggactgtgattcaaaaccttgaggaggctgagaatgttgctccaacagttaagatattt
catgccggaactgccttgaactcagacggcaacttcattgctactgggggccgagttctt
ggggtcactgccactggaagagatcttgaagaggcccgggacagagcttatcaggcagtt
gaggaaatcaactggccaggagggttctaccggcgagatattgggtggagagcgcttcct
cagaagcaattggctccaaaaaaataa
DBGET
integrated database retrieval system
