Populus trichocarpa (black cottonwood): 18098508
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Entry
18098508 CDS
T01077
Name
(RefSeq) ADP-ribosylation factor isoform X3
KO
K07937
ADP-ribosylation factor 1/2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18098508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18098508
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18098508
04031 GTP-binding proteins [BR:
pop04031
]
18098508
Membrane trafficking [BR:
pop04131
]
Endocytosis
Lipid raft mediated endocytosis
GRAF1-dependent endocytosis
18098508
Arf GTPases and associated proteins
Arf GTPases
18098508
Endosome - Golgi transport
18098508
Exosome [BR:
pop04147
]
Exosomal proteins
Proteins found in most exosomes
18098508
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Arf [OT]
18098508
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
G-alpha
SRPRB
Ras
Gtr1_RagA
MMR_HSR1
6PF2K
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
18098508
NCBI-ProteinID:
XP_006382311
UniProt:
A9P9X4
LinkDB
All DBs
Position
5:complement(524599..532392)
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AA seq
181 aa
AA seq
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MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV
LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggggctctcattcaccaagctttttagccgtctgtttgccaagaaagaaatgagaatt
ctcatggtgggtcttgatgctgctggtaagaccaccatcttgtacaagctcaagctcgga
gagattgtcaccactattccaacaattgggtttaatgtggagaccgtggaatacaagaac
ataagcttcactgtctgggatgttggtggccaggacaagattcgacctttgtggagacat
tatttccaaaacactcaagggctcatctttgtggttgatagcaatgatcgtgaccgtgtt
gttgaagctagggatgagctgcacaggatgttgaacgaggatgaattgagggatgctgtg
ctacttgtttttgcaaacaagcaagatcttccaaatgctatgaatgctgctgaaatcaca
gataagcttggtcttcattctcttcgtcaacgccactggtatatccagagcacttgtgcc
acttctggtgaaggtctttacgaaggactagactggctttccaacaacattgctagcaag
gcttaa
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integrated database retrieval system