Populus trichocarpa (black cottonwood): 18106110
Help
Entry
18106110 CDS
T01077
Name
(RefSeq) cystathionine beta-lyase, chloroplastic
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00270
Cysteine and methionine metabolism
pop00450
Selenocompound metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
18106110
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
18106110
Enzymes [BR:
pop01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
18106110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
GDC-P
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
18106110
NCBI-ProteinID:
XP_006373710
UniProt:
U5FQ77
LinkDB
All DBs
Position
16:complement(2357523..2362346)
Genome browser
AA seq
464 aa
AA seq
DB search
MTSSLSLKPYFSSLYTEVSNNRGLGSGFLPTSFWVKKDCSLRGKNLIIVKKFEVNCLKDK
DMDVRTSALVDGVAECLNEIEIKEPSVSTILMNFENKFDPYGAMSTPLYQTATFKQSSAT
ENGQYDYTRSGNPTRDALESLLAKLDKGDRALCFTSGMAALAAVTHLVGTGQEIVAGDDI
YGGSDRLLSQVTPKAGIVVKRVNTSDLHEVASAIGPQTKLVWLESPTNPRQQISDIRKIA
EMAHAHGALVLVDNSILSPVLSQPLELGADIVMHSVTKFIAGHSDVMAGVLVVKGESLAR
DLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQENAQKIAEFLAAHPRVKKVNYAGL
PGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS
HASIPAAVREARGLTEDLIRISVGIEDVNDLIADLDHAIRTGPL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttcgctctctctcaaaccctatttcagctctctctatactgaagtcagtaac
aaccggggtttgggaagtgggtttttgcctacaagtttttgggttaaaaaggactgcagt
ttaagggggaagaatttgattatagtaaagaaatttgaagtgaattgcttgaaagataaa
gatatggatgtgagaacttcagctttggttgatggtgtagcagagtgtttaaatgaaatt
gagattaaggaacctagtgtttcgacaatattgatgaattttgagaacaagttcgatcct
tatggtgcaatgagtacaccactttaccaaacagctacatttaagcagtcatcagcgaca
gagaatggtcaatatgattatactagaagtggaaatcctacaagggatgccttagaaagc
ctcctggcgaagctagataaaggagatcgggcattatgcttcacaagtggaatggctgct
ttggctgctgtcactcatcttgttggaacaggccaggaaattgttgctggagatgacatt
tatggtggttctgaccgattgttgtcacaagtaactccgaaggccggaattgtggttaaa
cgggtaaatacaagtgatctacatgaagttgcatctgcaattggtccccaaacaaagctc
gtgtggctagagagcccaactaaccctcgtcaacaaatttctgatattcgtaaaattgca
gagatggctcatgcacatggtgctcttgtcttggtagataatagtattttgtctcctgta
ttatcacaaccgctggaacttggagcagacattgtgatgcactcagtgactaaatttata
gctggacatagtgatgtcatggcaggtgtgcttgtggtaaaaggggaaagcttggcaaga
gatctgtatttcctccaaaatgcagaaggctctgggttagcaccatttgactgttggatt
tgcttacgaggcatcaaaaccatggccttacgagttgagaaacagcaggagaatgcacag
aaaattgccgagttccttgcagcacatccacgggtgaagaaagtaaattatgcaggtctt
cctggtcatcctggacgtgatttgcactattctcaggcaaagggtgcaggatcagtgctt
agctttctcacaggatcactggctctctcgaagcatgttgttgagactaccaagtatttc
agcataactgtcagttttgggagtgtaaaatcccttataagcatgccctgcttcatgtcc
catgcaagtataccagctgcagtacgagaagccagaggtctcactgaagatcttattcgt
atctcagtggggatagaggatgtcaatgatctgattgctgatttagaccatgcaataaga
actggaccattatag
DBGET
integrated database retrieval system
