Populus trichocarpa (black cottonwood): 18109321
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Entry
18109321 CDS
T01077
Name
(RefSeq) calcium permeable stress-gated cation channel 1 isoform X2
KO
K21989
calcium permeable stress-gated cation channel
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18109321
Transporters [BR:
pop02000
]
Other transporters
Pores ion channels [TC:
1
]
18109321
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
18109321
NCBI-ProteinID:
XP_024454249
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Position
4:357008..372149
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AA seq
750 aa
AA seq
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MATLADITVSGAINVLSAFIFLLAFAILRLQPLNDRVYFPKWYLKGVRGSPSRSGALVRR
VVNLDFRSYIRFLNWMPEALKMPEPELIDHAGLDYAVYLRIYLMGLKIFVPITILALAIL
VPVNYTNNALEAVKMVANVTASDIDKLSISNIPLKSQREYEKVASMRLQFLSLERRRLDQ
FTVLVRNVPPDPDETVSELLEHFFLVNHPDHYLTHQVVCNANKLASLVKKKKKKQNWLDY
YQLKYSRNQSQRPQMKTGFLGHFGGKVDAIDHHISEIEELSKEIEEERTRVLKDPKSIMP
AAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWQNLAIPYMSLKVRRLIIGVA
FLLLTFFFIIPIASVQALASIEGIEKRAPFLKSVIEIKFIKSVIQGFLPGIVLKLFLIFL
PTILMIMSKFEGFISLSSLERRSATRNYIFLVINVFLGSILTGAAFEQLNSFIKQSANEI
PKTIGVAVPMKATFFITYIMVDGWAGIAGEVLMLKPLIFYHLKNFLLVKTEKDREEAMDP
GSLGFHTGEPRIQLYFLLGLVYATVTPVLLPFIVIFFAFAYLVFRHQIINVYNHEYESGA
AFWPDVHGRIITGLVISQLALMGLLSTKEAAQSTPFLVALPVLTIWFHRFCNGRHKSAFV
KYPLQEAMMKDTLERARDPNFNLKACLHSAYVHPIFKGDDDDEDDLSVEMETESVLVPTK
RQSQRNTPVPSKISGGYSPSLPEAVKNGEL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctcgcagatataacggtttccggagctataaatgtactgagtgcattcatt
ttcttattggcgtttgcaattttgaggctacaacctctcaatgatagagtttactttcca
aaatggtatctgaagggcgtaagaggcagcccctcgcgctctggggcgcttgttcgtagg
gttgtgaatttagactttaggtcatatatccggtttttaaattggatgccggaagcgctt
aaaatgccggagcctgagcttattgatcatgcaggattggattatgctgtttacttgcgc
atttacttgatgggacttaagatttttgtacctataacaatccttgctttggctatcctg
gtgccagtcaactacaccaataatgctctagaggcagtcaagatggtggccaacgtgact
gctagtgacattgacaagctttcaatttcgaatataccacttaaatcacaaagggagtat
gagaaagttgcttcaatgaggttgcaatttctttccttggaaagacgtcgtctagatcaa
ttcacagtccttgttaggaatgtacctcctgatccagatgaaactgtcagtgagctcttg
gagcacttttttctagtgaatcacccagatcattacctcactcatcaggtggtgtgcaat
gccaacaaactagccagcttggtcaagaagaagaaaaaaaagcagaactggcttgactac
taccaactcaagtactccaggaatcaatcgcagaggcctcagatgaagactggtttcctt
gggcattttgggggaaaagtggatgcaatcgatcatcacatatcagagattgaggaactg
tcaaaagaaatagaagaagagaggacaagggtattaaaggatccaaagtctatcatgcca
gcagcatttgtttcattcaagactcgatggggtgcagctgtctgtgcacaaactcaacaa
tcaagaaatccgactttgtggttaacagagtgggctccggagccacgcgatgtatattgg
caaaacttagccattccgtacatgtcactcaaagttaggaggctgataattggagttgca
ttccttttacttaccttctttttcataatacctattgcatctgtacaagctctagcaagt
atcgagggaatagagaagagagccccttttctgaagtctgttattgaaataaaatttatc
aaatctgttatccaaggttttcttcctggcattgtgttgaagctcttccttatcttcctg
ccaacaatattgatgatcatgtctaaatttgaaggcttcatatctctatcatctttggaa
aggagatcagcaacaagaaattatattttcctcgttatcaatgtattccttgggagcata
ctcactggagctgcatttgaacagctaaattcttttattaagcagtctgctaacgaaatt
cctaaaacaattggtgtagctgttccaatgaaagcaactttcttcataacctatataatg
gttgatggatgggctgggattgctggggaagttttaatgttgaaaccactgatattctac
cacttgaaaaatttccttttggtgaagactgaaaaagacagggaagaggcaatggatcct
ggaagtcttggttttcacactggcgaaccccgtatacaattatattttctgctagggctt
gtatatgcaacagtgacaccagttctccttccattcatagttattttcttcgccttcgcc
tatttagtgttccgtcatcagatcataaatgtttacaaccacgagtatgaaagtggtgca
gcattctggcctgatgtccacgggcgtattattactgggctagtaatctcacagctggct
ctgatgggattactgagtacaaaagaagctgcacagtcaacaccatttctcgttgctctc
cctgtcctcactatatggtttcataggttctgcaatggacgccacaaatctgcatttgtc
aaatatccattacaggaagcaatgatgaaagataccctggaacgagcaagggatccaaac
tttaatctgaaagcttgccttcatagtgcatatgttcatccaattttcaaaggtgacgat
gatgatgaagacgacctgagcgtagagatggaaactgagagtgtcttagtgcctacaaaa
cgccaatcgcaaagaaatacaccagtaccaagcaaaatcagtgggggatactcaccatct
ttgccggaggcagttaaaaatggagagctctga
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