Populus trichocarpa (black cottonwood): 7454412
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Entry
7454412 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 15
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7454412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7454412
04147 Exosome [BR:
pop04147
]
7454412
04090 CD molecules [BR:
pop04090
]
7454412
Enzymes [BR:
pop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
7454412
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
7454412
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7454412
CD molecules [BR:
pop04090
]
Proteins
7454412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_15
AAA_22
AAA_30
ABC_ATPase
AAA_25
DLIC
nSTAND1
AAA_23
CoaE
Motif
Other DBs
NCBI-GeneID:
7454412
NCBI-ProteinID:
XP_052312918
LinkDB
All DBs
Position
11:16691106..16696267
Genome browser
AA seq
1237 aa
AA seq
DB search
MGGKDSMFRYADGMDKLLMFFGVLGSVGEGLRHPLTMYVLSHVINDYGSSGISLSTDTVN
KYSLKLLYIAIAVGLAAFVEGLCWTRTAERQTSRMRTEYLKSVLRQEVGFFDTQDAGSST
TYQVVSTISNDASAIQVAICEKIPDCLAQMSCFFFCLVFSFILSWKFTLAALPFALMFIV
PGLVFGKLMMDVTMKMIEAYGVAGGIAEQAISSIRTVYSYVAENQTLDRFSRALQETIEL
GIKQGFAKGLMMGSMGMVYVSWAFQAWAGTYLVTEKGEKGGSIFVAGINIMMGGLSVLGA
LPNLTSITEATVAATRIFQMIERTPSIDLEDKKGKALSYARGEIDFQDIHFSYPSRPDTP
ILRGLNLRIPAGKTVGLVGGSGSGKSTVISLLQRFYEPNEGQILLDGHKINRLQLKWWRS
QMGLVNQEPVLFATSIKENILFGKEGALMDDVINAAKDANAHDFITKLTDGYETQVGQFG
FQLSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQDAIDQASKGRTTITIAHR
LSTIRTANLIVVLQSGRVIESGSHDQLMQINNGRGGEYFRMVQLQQMAAQKENFNDFIYR
NDGKNSFRMSPAPSPVSLRKSTPRTPVLSPFSPALSIGTPYSYSIYDPDDESFEDDLNQL
NYPAPSQWRLLKMNAPEWGRGLTGCLAAIGAGAVQPINAYCAGSLMSNYFRSDKSAIKHK
SNVLALIFLFIGALNFITSLLQHYNFAIMGERLTKRVREKLLAKLMTFEIGWFDDDENTS
AAICARLATEASMVRSLVGDRMSLLVQTFFGSVFAYSIGLVLTWRLTLVMIAVQPLVIGS
FYLRSVLMKSMAGKAQKAQMEGSQLASLGLFCSQFFNTAFITLTYWYGGRLLTEGLITSE
RLFQAFLILLFTAYVIAEAGSMTNDISKGGNAIRTIFAILDRKSEIDPNNSFGASNIRRK
LNGQVEFNNVYFAYPTRPDQMIFKGLNLKIDAGKTVALVGPSGSGKSTIIGLIERFYDPL
KGAVFIDRQDIKRYNLRMLRSHIALVSQEPTLFAGTIRENIAYGKENARESEIRKAAVVA
NAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKDPSILLLDEATSALDSVSES
LVQEALENMMVGRTCVVIAHRLSTIQKSNSIAVIKNGKVVEQGSHKELIALGSSGEYYSL
TKLQSGSSSYQXSRIIWSLDCHRRKVYSFLSLDWHDF
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtaaagatagcatgtttcggtacgctgatggcatggacaagttgttgatgttc
tttggggttttgggcagtgttggagaagggttacgacaccctctcacaatgtatgttctt
agccatgtcatcaatgactatggtagctctggtatttctttgtctactgatactgtaaac
aagtattctctcaagctcctgtatattgcaattgctgttggacttgctgcatttgttgaa
ggattgtgttggacgagaactgctgagagacagacttctcggatgagaacggaatatttg
aaatcggtccttagacaagaagttggtttctttgacactcaagatgctggttcttccaca
acctatcaagttgtcagcaccatctccaacgatgccagtgctatccaagtagcaatatgt
gagaagatacctgactgccttgcacaaatgtcatgcttcttcttctgccttgtgttttcc
ttcatactatcgtggaagtttactctggcagctcttccttttgcattgatgtttattgtc
ccgggacttgtattcgggaagctcatgatggacgtgacaatgaagatgattgaagcttat
ggagttgctggtgggattgcggaacaagccatttcttcaataagaactgtatactcatat
gtggcggagaatcaaacactagaccggttcagccgagcacttcaagagactatagaatta
ggaataaagcaaggtttcgcaaagggattgatgatgggaagcatgggaatggtttatgta
agttgggcatttcaagcttgggctggcacttatttggtgactgagaagggagaaaagggt
ggttctatctttgtagctggaatcaatataatgatgggaggactgagcgtattaggtgca
ctcccaaatctaacttccatcacagaggcaacagttgctgctacgcgtatttttcaaatg
attgaacgaactccaagtatagacttggaagacaagaaggggaaggctttatcatatgca
agaggagaaattgattttcaggacatacattttagctatccatcaagacctgacacacca
atcttgcgagggttgaatctcaggattccagctgggaagacagttggtcttgtgggaggc
agtggctccggaaagtctacagtcatttcattgcttcaaagattttatgagcccaatgaa
ggacaaattctcttagatggacacaaaataaataggcttcagctcaaatggtggagatcc
caaatgggtctagttaatcaggaaccagtcctctttgccacatctataaaggagaatata
ttgtttgggaaggaaggtgccttgatggatgatgtgatcaatgctgctaaggatgcaaat
gcacatgacttcataactaagttaactgatggatatgaaacacaagttggccagtttgga
ttccaattatctggggggcaaaagcagcgtattgccattgcaagggctctgatcagagac
cccaaaatcctgcttctagatgaggcaaccagtgcactggatgcacagtctgaaagaata
gttcaggatgcaattgatcaggcatcgaaaggaaggacaacaatcaccattgcgcatcgc
ctctccacaatcagaacagcaaacctgattgttgttcttcaatcagggagagtaattgaa
tcaggttcacatgaccagttaatgcaaataaataatggaagaggtggagaatacttccgg
atggtgcagttgcaacagatggcagcacagaaagaaaattttaatgacttcatctataga
aatgatggaaagaactcctttaggatgagtcctgctcccagtccggttagcttgagaaaa
agcactccacgcaccccagtgttaagcccctttagcccagcattgtctatcggcacacct
tattcctactcaatctatgatcctgatgatgaaagtttcgaagacgacttaaaccaactg
aattatccggcaccttctcagtggcgtctgctgaaaatgaatgcacctgaatggggacga
ggcttgactggatgcttggctgcaataggtgctggagcggttcaacctattaatgcttac
tgtgcaggatcacttatgtcaaactacttccgcagtgacaaatctgctatcaaacataaa
tccaacgtattggccttgatttttttatttattggtgctctcaacttcatcaccagcctc
ctccaacattataattttgcaattatgggagagaggttgacgaaaagagtacgcgagaaa
ctgctagcaaagctgatgacttttgagatagggtggtttgatgatgatgagaatacaagt
gcagcaatttgtgcaaggctagccactgaagccagcatggttcgctcccttgttggggat
cggatgtcattgctagtacaaacattctttggttctgtctttgcttattcaataggactt
gttctaacatggaggctaacccttgttatgatagctgtgcaaccattagttattggaagt
ttttatttgaggagtgttttgatgaaaagtatggccgggaaagcacaaaaggcacaaatg
gaaggaagccaactagcaagtcttggcctgttttgctcccagttttttaacacggctttt
atcacactaacatactggtatggtgggaggctcctgacggaagggttaataacctcagag
cgccttttccaagcatttttgatactgcttttcactgcttatgtcattgcagaagctgga
agcatgactaatgatatatccaaaggaggcaatgcaattcgaacaatatttgcaattctc
gataggaaaagtgagattgatccaaacaactcatttggtgcttcgaacatcaggagaaag
ttaaatggccaagtggagttcaacaatgtctactttgcttatccaacaagaccagatcaa
atgatcttcaaaggcttgaacctcaaaattgatgcagggaagacagtggcactggtaggg
ccaagtggttctggaaaatctactatcattggacttattgagaggttttacgatcccttg
aaaggagcagtttttattgacagacaggacataaagagatacaatttgagaatgctgaga
tctcatattgcactagtcagtcaagaaccaacactgtttgctggcactatccgcgaaaat
attgcctatggcaaagagaatgcaagagaatctgagatacgaaaggctgcagttgttgcc
aatgcacatgaattcatcagtggaatgaaagatgggtatgatacctactgtggagaaaga
ggagttcagctatcaggaggtcaaaaacaaaggatagcacttgctcgtgcgatactgaag
gatccttcaatcctgttgttggatgaggcaaccagtgcacttgacagtgtgtcagagagc
ttagttcaagaggcacttgagaacatgatggttggcagaacatgtgtagtcattgctcac
agactgtcaacaattcagaaatccaacagcattgcggttatcaagaacggaaaggttgta
gaacaaggctcacacaaagaactcatagcattaggtagcagtggagaatactactctctg
acaaaactacaaagcggaagctcctcttatcaataaagcagaatcatctggagtctggac
tgccataggaggaaagtctactcttttttaagtctggactggcatgatttttga
DBGET
integrated database retrieval system
