Populus trichocarpa (black cottonwood): 7456250
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Entry
7456250 CDS
T01077
Name
(RefSeq) actin-related protein 2 isoform X2
KO
K17260
actin-related protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7456250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7456250
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7456250
04147 Exosome [BR:
pop04147
]
7456250
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Arp2/3 complex
7456250
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
7456250
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7456250
Exosomal proteins of other body fluids (saliva and urine)
7456250
Exosomal proteins of bladder cancer cells
7456250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
7456250
NCBI-ProteinID:
XP_002298643
UniProt:
B9GF54
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All DBs
Position
1:complement(33565567..33571130)
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AA seq
389 aa
AA seq
DB search
MDSRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPMLRYEESLMEHQLKDIVVGEACA
GLRHQLDISYPVNNGIVQNWDDMGHVWDHAFYNQLKIDPMECKILLTDPPLNPSKNREKM
VETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMN
VAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQLGLETTILVKN
YTLPDGRIIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVL
SGGSTMYPGLPSRLEKEILDRYLDAVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG
IMKDAPEFWISRDDYLEEGMACLSKCGQA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggacagtagaaacgtcgtcgtttgcgataatggcacagggtatgtaaagtgtggattt
gctggagagaatttcccgacgtctgtattcccgtgtgtggttggaaggccgatgctacgc
tacgaggaatcactaatggaacatcaattgaaggatatcgttgttggagaggcttgtgct
ggcttgaggcatcagttagatatatcttatcctgttaacaatggaatcgttcagaactgg
gatgatatgggtcatgtgtgggatcatgccttttataatcaacttaaaatagatccaatg
gaatgtaagattttactcacagacccacctcttaatccctcaaaaaatcgtgaaaaaatg
gtcgagacaatgtttgagaaatacaattttgctggtgtcttcattcaaatccaagctgtt
ttaacattgtatgcccaaggtttactgactggattagttattgattctggcgatggggtt
actcatgtggttcctgttgttgatggctattcattccctcatctaactaagcgaatgaac
gtagctggtcgacacattacatcctatcttgttgatttactttcacgaagagggtatgca
atgaataggactgctgattttgagactgtcagggaaatcaaagaaaaactctgctatatt
agttatgactacaagagggagtatcaattgggacttgagaccaccatactggttaaaaac
tatacactgccagatggaaggatcattaaagtaggcactgaaaggttccaggcccctgag
gctctttttacaccggaactcatagatgttgaaggtgatgggatggctgacatggttttt
cgctgcattcaagaaatggatatcgacaaccgtatgatgctctaccagcatatagtctta
agtggagggagcaccatgtatcctggattacctagccggctggagaaagaaatactggat
cgctatctagatgcagttctcaagggaaacaaggacgggttaaagaaacttcgattgagg
attgaagatccaccacgaagaaagcatatggtctaccttggtggtgcagttcttgcagga
attatgaaggatgcacctgagttctggattagcagagatgattatctagaagaagggatg
gcttgtttgagtaagtgtggtcaggcataa
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