Populus trichocarpa (black cottonwood): 7458279
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Entry
7458279 CDS
T01077
Name
(RefSeq) 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial isoform X1
KO
K09458
3-oxoacyl-[acyl-carrier-protein] synthase II [EC:
2.3.1.179
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00061
Fatty acid biosynthesis
pop00780
Biotin metabolism
pop01100
Metabolic pathways
pop01212
Fatty acid metabolism
pop01240
Biosynthesis of cofactors
Module
pop_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
7458279
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
7458279
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pop01004
]
7458279
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.179 beta-ketoacyl-[acyl-carrier-protein] synthase II
7458279
Lipid biosynthesis proteins [BR:
pop01004
]
Fatty acid synthase
Component type
7458279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Thiolase_C
IreB
KAsynt_C_assoc
Motif
Other DBs
NCBI-GeneID:
7458279
NCBI-ProteinID:
XP_024450050
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All DBs
Position
2:complement(20986835..20992305)
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AA seq
472 aa
AA seq
DB search
MASSSRWRRLLSSSPFRYQLTRRHLSSSFGPPPPVTPRRVVVTGIGMVTPLGCGVQTTWK
RLIEGECGVRAITPEDLKMNSSFDTETQLYTFDQLTSKVAAVVPCGTKTGEFNADLWLNS
KEHRSVSRFIGYALCAADEALKDAKWAPTEQEQKERTGVSIGGGIGSITDVLEASQLICE
KRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSN
VMVAGGTESSIDALSIAGFCRSRALTTKHNSMPLEASRPFDCDRDGFVIGEGSGVLVLEE
LEHAKERGAKIYAEIRGYGMSGDAYHITQPHNDGRGAVLAMTRALKQSGLHPNQVDYINA
HATSTPLGDAVEAIAIKTVFSEHATSGALAFSSTKGAIGHLLGAAGAVEAIFAILAVHHG
IAPLTLNLNKPDPLFKDNFMPLTASKEMPVRAALSNSFGFGGTNASLLFTSV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcttctcgttggcgtcgattattatcatcatctccctttcgctaccaactg
actcgtcgtcacttatcttcttcctttggccctcctccaccagtcactcctcgccgagta
gtcgtcaccggtataggcatggtgacccctcttggttgcggagtgcaaacgacgtggaag
cgcttgatagagggagaatgtggtgttcgggcaataacaccagaggatctcaaaatgaac
tcttctttcgatacagagactcagctgtacacttttgatcagcttacctctaaagttgct
gctgtcgttccttgcggcaccaaaactggcgaattcaatgcggatttatggcttaattct
aaggagcatcgatcagtttcaaggtttataggctatgcgctgtgtgctgctgatgaagct
cttaaagatgcaaaatgggcgcccactgagcaggaacagaaggaaagaacgggtgtctct
attggtggggggattggaagcataactgatgtgctggaagcctcgcaactgatttgtgag
aagcgacttcgtcggcttagtccatttttcatcccacggatattgatcaacatggcatct
ggtcatgtgagcatgaaatatggattccagggaccaaaccatgctgctgtgacagcttgt
gctactggagcacattctattggcgatgctgcaaggatgattcaatttggggattcaaac
gttatggtggctggagggacagagtccagcatagatgctttatctatagcaggattttgt
agatcaagggcattaaccacgaagcacaattccatgcctctagaagcttctcgacctttt
gattgtgatcgggatggatttgtcataggtgaaggttctggagtcttggtattagaagaa
cttgagcatgcaaaagaacgaggagcaaaaatttatgcagagattcgcggctacgggatg
tcaggtgatgcatatcacattactcaaccacataatgatggaaggggagctgttctggca
atgacacgtgccttgaaacagtctggtcttcatcccaatcaagtggattacataaatgcc
catgctacatctacacctttgggtgatgctgtagaagccattgccatcaaaactgtgttc
tctgaacatgcaacatcaggtgctttggcattctcttccacaaagggtgccattggccat
ctactaggagctgctggtgctgttgaagccatatttgcaattttagctgtgcatcatgga
attgcaccattgactcttaacctcaataaaccagatcccctcttcaaagacaattttatg
ccattgactgcatcgaaagagatgccggtaagagcagctttgtcgaattcttttggcttc
ggaggaacaaatgcatctctacttttcacctcagtgtaa
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