Populus trichocarpa (black cottonwood): 7479272
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Entry
7479272 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7479272
KO
K12869
crooked neck
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7479272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7479272
03036 Chromosome and associated proteins [BR:
pop03036
]
7479272
Spliceosome [BR:
pop03041
]
Complex B
Other components
Prp19-related factors
7479272
Complex C
7479272
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
7479272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_2
TPR_17
TPR_8
Mad3_BUB1_I
Wzy_C_2
RAB3GAP2_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
7479272
NCBI-ProteinID:
XP_002299492
UniProt:
B9GL87
LinkDB
All DBs
Position
1:complement(7471714..7476824)
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AA seq
687 aa
AA seq
DB search
MASNRDGDPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK
QKITDSTELADYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFNRARSVWERALEV
DYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRIDQLWYKYIHMEEMLGNVAGARQ
IFERWMGWMPDQQGWLSYIKFELRYNEVERARGIFERFVQCHPKVSAWIRYAKFEMKNGE
VARARNVYERAVEKLADDEEAEMLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDL
YRKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKNPLNYDAWFDYIRLEESVGNKERIR
EVYERAIANVPPAQEKRYWQRYIYLWINYALYEELDAEDIEQTREVYRECLNLIPHEIFS
FAKIWLLAAQFEIRQLNLKGARQVLGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEK
YLEWSPENCYAWSKYAELERSLSETERARSIFELAIAQPALDMPELLWKAYIDFEISEGE
YDRTRELYKRLLDRTKHLKVWISCAKFEASAMEEQKLCVQNARRVFEKALNYFRMSAPEL
KEERAMLLDEWLDMEKSFGQLGDVSLVEPKLPKKLKKRKQIASEDGLAGYEEYIDYVFPE
EAHAHNLKILEKAREWKRQKLASGAED
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaatagggacggagatccttctctcggctacctaacccgaaaagacactgag
gtaaagctcccccgcccgacccgagtgaagaacaaaacccccgccccgatccaaatcaca
gcggagcaaatcctccgcgaagcacgagaacgacaagaagctgaaattcgaccgcccaaa
cagaaaatcacagactcgactgaactggccgactaccgtctccgcaagaggaaagaattc
gaggatttaattagacgagtgaggtggaacatcagtgtttggatcaagtacgcgcagtgg
gaagagtcgcagaaggatttcaatcgcgcgcgttcagtttgggagcgtgcactcgaggtg
gattaccggaatcatactctatggctaaaatacgcggaagtggagatgaaaaacaagttt
ataaatcatgccagaaatgtgtgggaccgggcggtcactcttctccccaggattgatcag
ctctggtataagtatattcatatggaggagatgttggggaatgttgctggagcgaggcag
attttcgagagatggatggggtggatgccggaccagcaaggttggctttcctatataaag
tttgaattgaggtataatgaggtggaacgtgcacgggggatttttgagaggtttgttcag
tgtcatcccaaggtgagtgcgtggattaggtatgccaagtttgagatgaagaatggggag
gttgcgagggcaaggaatgtatatgaaagggcggttgagaagttggctgatgatgaggag
gcagagatgttgtttgttgcgtttgcagagtttgaagagaggtgcaaagaaacggagagg
gcgaggtgcatttataaatttgcattggatcatataccgaaagggagggcagaggatttg
tataggaagtttgtcgcatttgagaaacagtatggtgataaagaagggattgaggatgcg
attgtgggcaagaggaggtttcagtatgaagatgaagtgaggaagaatcctttgaattat
gatgcgtggtttgattatattaggttggaggagagtgtggggaataaggagaggattaga
gaggtgtatgaacgtgcaattgctaatgtccctcctgcccaagagaagagatactggcag
agatatatttatctgtggataaattatgccctttatgaagagctcgatgcagaagatata
gaacaaacacgtgaggtatatagggaatgcttgaatctgatcccacatgagatattttca
tttgcaaaaatttggcttttagcagcccaatttgagatccgacaattgaatctgaaggga
gctcgacaagttttaggtaacgccattggaaaagctcctaaggataagatatttaagaaa
tatattgagattgagctgcagcttggaaatatcgatcgttgccgaaaactctatgagaaa
tatttagagtggtcgcccgagaattgctatgcttggagcaaatatgctgagctggagaga
tccttgagtgaaactgaacgggcccgatctatttttgagcttgctatagcacagccagcc
ttggatatgccagagttgttgtggaaggcatacattgattttgaaatctctgagggcgaa
tacgatagaactcgggaactttacaagagacttttggatcgcacaaagcatctaaaagtt
tggatcagctgtgctaaattcgaggcatctgccatggaagaacagaagctgtgtgttcaa
aatgcaagaagggtttttgagaaagcattaaactactttagaatgtccgcccctgaactg
aaagaagaaagagctatgctcttagatgaatggttggacatggagaaaagttttgggcag
ctaggtgatgttagccttgttgagcctaaactgcctaagaaactgaaaaagagaaagcag
attgcttctgaagatggcctggctgggtacgaggaatacatagattacgtatttccagaa
gaagctcatgcacataatctcaaaatcttggaaaaagcacgtgaatggaagaggcaaaag
cttgcatccggtgctgaggactag
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