KEGG   Populus trichocarpa (black cottonwood): 7480058
Entry
7480058           CDS       T01077                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    7480058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7480058
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pop02044]
    7480058
Membrane trafficking [BR:pop04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    7480058
Secretion system [BR:pop02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   7480058
SSDB
Motif
Pfam: WD40 Sec16_C SRA1 SatD MIOS_WD40 Prp18
Other DBs
NCBI-GeneID: 7480058
NCBI-ProteinID: XP_024436703
LinkDB
Position
1:complement(27706512..27719487)
AA seq 1138 aa
MAAIKSVNRSASVALAPDSPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSEDHDLPVVGE
CQSSERFNRLAWGRNGSGSNTYGLGLIAGGLVDGNIDILNPLSLIRSEASESALVGHLSR
HKGPVRGLEFNSITPNLLASGADDGEICIWDLAAPAEPSHFPPLKGTGSASQGEISYVSW
NCRVQHILASTSSNGITVVWDLKKQKPAISFGDSIRRRCSVLQWHPDVATQLVVASDEDG
SPSLRLWDMRNIIEPVKEYVGHTKGVIGMSWCPNDSSYLLTCAKDNRTICWNTVTAEIVC
ELPAGTNWNFDVHWYPRMPGVISASSFDGKVGIYNIEGCSRYTAGDNDFGRAKLRAPKWC
ECPVGASFGFGGKLVSFRPKLHAAGASEVFLHNLVTEDSLVSRSSEFESAIQNGEKSLLK
ALCDKKSQESESEDDRETWGFLKVMFEEDGTARTRMLAHLGFSVPIEEKDAVQENGLNQE
INAVRLDDTPTDKVGYENNKEATIFSADDGEDFFNNLPSPKADASLAPSGDNLDLGNSAP
IAEEISQEPETLEESADPSFDDSIQCALVVGDYKGAVAQCISANKIADALVIAHAGGTSL
WENTRDQYLKLSPSPYLKIVSAMVNNDLLTLVNTRPLKYWKETLALLCTFAPSEEWSMLC
NSLASKLIAAGNTLAATLCYICAGNIDKTVEIWSRSLSTESEGKSYIDLLQDLMEKTIVL
ALASGQKQFSASLCKLVEKYAEILASQGLLTTALEYLKLLGSDDLSPELTIIRDRIALSM
EPEKEAKTPAFENTQQQGGSFYGAQHPGFGVADAPHTYYQGAVTQQMNQSVPGSLYSENN
QQPIDSSYGRGFGAPSPYQPSPPPPAYQPAPLPQMFVPTPTPQAPKTNFAPPPPHAAASQ
QPTRPFVPANVPMLRNAEQYQQPTLGSQLYPGTANPAYNPVQPPTGSQGPITAQTGAIPG
HRMPQVVAPGPTPMGFRPVHSGVVQRPGIGSMQPPSPTQPASMQPAVVPAAPPPTVQTVD
TSNVPAHHRPVITTLTRLFKETSEALGGARANPARKREIEDNSRKIGALFAKLNSGDISE
NASDKLFQLCQALDMNDFSTALQIQVLLTTSEWDECNFWLATLKRMIKTRQGAGVRSS
NT seq 3417 nt   +upstreamnt  +downstreamnt
atggcggccattaagtcggtgaatagatcggcgtcggtggcgttagccccggactcgcct
tacatggcagcggggacgatggcgggggcggttgatctgtcatttagctcgtctgcgaat
cttgagatctttaagcttgatttccaatcggaagatcatgatctccctgttgttggtgag
tgtcaaagttctgagagatttaatcgtctcgcatggggcaggaatggatccggctctaat
acatatggtcttggacttattgctggtggccttgttgatggcaatatcgacattttgaat
cccttgtccctgatccgttctgaggcaagtgaaagtgctcttgttggtcatctatcacgt
cacaaagggcctgttcgtggccttgaatttaattccatcacccctaacttacttgcatct
ggcgctgatgatggtgaaatctgcatttgggatttggctgcacctgcagaaccttctcat
tttccacctctcaagggtactggttctgcctctcaaggagagatttcgtatgtttcctgg
aattgcagagttcaacatatattagcatccacttcttccaatggaataacagtggtttgg
gacctaaagaagcagaaaccagcaatttcttttggagattcaattagaaggcggtgctct
gttttgcagtggcatcccgatgttgccactcagcttgttgttgcgtcggatgaagatggg
tctccttctcttcggctttgggacatgcgaaacataattgaacctgtgaaggagtatgtg
ggacacactaaaggtgtaataggaatgtcatggtgtcccaatgacagctcatatttgctt
acctgcgctaaagataatcgaacaatctgctggaatacagtaactgcagagattgtctgt
gaattgccagctggcaccaactggaacttcgatgttcattggtatcccaggatgcctggg
gttatatcagcatcatcttttgatggaaaagttggcatttacaacattgagggttgcagt
cgatatactgctggggacaacgactttggaagagcaaaactaagagctccaaaatggtgt
gagtgtccggttggggcttcttttggctttggaggaaagcttgtatcatttcgccctaag
ttacatgctgctggtgcttccgaggtttttttgcataacttagttaccgaagacagtttg
gtgagtcgatcatctgaatttgaaagtgccatacaaaatggggagaagtctttgctaaag
gctttatgtgataaaaaatctcaagagtctgaatcagaggatgatcgagaaacttggggt
ttcttaaaggtgatgtttgaagaagatggaacagcaaggactaggatgcttgcccacctt
ggttttagtgtacccattgaagaaaaagatgctgtacaggagaatggtctcaaccaggaa
ataaatgccgttcgactcgatgatacacctactgacaaagtgggatatgagaataataaa
gaggccaccatcttctctgctgatgatggggaagacttttttaacaaccttccaagtcct
aaagctgatgcttctttggcgccgtctggtgataatcttgatcttgggaattctgctcct
attgcggaagaaatatcacaagaaccagagacattggaggagagtgctgacccatcattt
gatgatagtatacaatgtgctttggttgtgggagactacaaaggggctgttgcacagtgc
atatcagcaaataaaattgctgatgctttagttattgctcatgctggtggcacttcatta
tgggagaatacacgtgatcaatatcttaaattgagtccttcaccttacttgaagattgtt
tctgcaatggtgaacaatgatcttttgacccttgtaaacaccaggcctctcaaatactgg
aaagaaactcttgcactcctttgtacattcgcaccaagtgaggaatggagtatgctatgc
aattcacttgcttcaaaattaatagctgctggtaatactttggcggcaactctttgttat
atatgtgctggcaatattgacaaaacagttgaaatttggtcaaggagtctgtccactgag
agtgaagggaaatcgtacattgatcttcttcaggatttgatggagaagaccatcgtcctt
gctctggcaagtggtcaaaagcaatttagtgcctctttgtgcaagcttgttgagaagtat
gctgaaattttagccagtcagggcctcttaacaacagcactagagtacttgaaacttttg
ggttctgatgatttgtctcctgagcttacaatcataagagaccgtattgctctctccatg
gaacctgagaaagaagctaagactccagcttttgagaacacccaacagcaaggtggatca
ttttatggtgcccaacatcctggttttggtgtggctgatgcccctcatacttattatcag
ggagcagttactcaacaaatgaaccagagtgttcctgggagtctatacagtgaaaataat
cagcaacctattgactcgtcgtacggaagaggatttggtgctccttctccctatcagcct
tcaccaccgcccccggcatatcagcctgcaccactgccccaaatgtttgttccaactcct
acaccacaggcacctaagacaaattttgctccacctccacctcatgctgctgcctctcaa
cagcctacgaggccttttgtccctgcaaatgttcccatgctaagaaatgcagaacagtat
cagcaacccacattgggctctcagttatatcctgggactgccaatcctgcctataatcct
gtacaacccccaactggttcacaaggacctatcacagctcagacgggtgcaattcctggc
cacagaatgccacaagttgttgctcctggcccaacaccaatgggatttaggcctgtacat
tcaggggttgttcaaagacctgggattggttcaatgcaaccgccaagtcctactcagcct
gcatcaatgcaaccagctgtggttcctgctgctccaccgcctaccgtgcaaacagtcgac
acctcaaatgttcctgctcaccatagaccagtcattacaacattgacaagactatttaaa
gagacatcagaagctttgggaggtgcccgtgcaaatccagccaggaagcgtgaaattgaa
gataattcaaggaaaataggtgccttgtttgctaaactcaacagtggggatatatctgaa
aatgcttctgataagctttttcagctatgccaggctttggacatgaatgattttagcaca
gctctgcaaatccaggtacttcttaccacaagtgagtgggatgaatgtaacttctggcta
gcaacgctcaaaagaatgatcaagacaaggcagggcgctggtgtgagatcaagttaa

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