Populus trichocarpa (black cottonwood): 7481757
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Entry
7481757 CDS
T01077
Name
(RefSeq) long chain acyl-CoA synthetase 7, peroxisomal
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00061
Fatty acid biosynthesis
pop00071
Fatty acid degradation
pop01100
Metabolic pathways
pop01212
Fatty acid metabolism
pop04146
Peroxisome
Module
pop_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
7481757
00071 Fatty acid degradation
7481757
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7481757
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pop01004
]
7481757
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7481757
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
7481757
Lipid biosynthesis proteins [BR:
pop01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
7481757
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of breast milk
7481757
Exosomal proteins of breast cancer cells
7481757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
7481757
NCBI-ProteinID:
XP_002319009
UniProt:
B9I7R9
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All DBs
Position
13:1378783..1387054
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AA seq
695 aa
AA seq
DB search
MDSPAQRRLKSIQSHILSSTTADQSDLQANLTSSSQFVHRQQYSVCLPEKLQTGKWNVYR
SARSPMKIVTRFHDHPEIETLHDNFVHAVKTFGDYKYLGTRVQADGMIGEYTWMTYGEAG
AAREAIGSALRFHGLQKGACIGLYFINRPEWLIVDHACTAYSYISVPLYDTLGPDAVKYV
VNHADVQAIFCVPETLNTLLSFISEIPSVRLIVVVGGVDEHLPSLPLASGVKLRSYTKLF
SEGRSSLQPFIPPKPEDVATICYTSGTTGTPKGVVLTHNNLISSVAGFCMAIKFNPADIY
ISYLPLAHIYERSNQIVSVYYGVAVGFYQGDNLKLLDDLSALRPTILCSVPRLYNRIYDG
IINAVKSSGVLKERLFRAAYNSKKQALMSGRNPSPMWDRLVFNKIKEKLGGRVRFMGSGA
SPLSPDVMDFLRVCFGCQVLEGYGMTETSCVISSVDQGDNLSGHVGSPNPACEIKLVDVP
EMNYTSEDQPHPRGEICVRGPTIFQGYYKAEVQMREVIDDDGWLHTGDIGLWLPGGRLKI
IDRKKNIFKLAQGEYIAPEKVENVYTKCRFVSQCFIYGDSFNSSLVAVVAVEPDVLRDWA
VSEGIKHDDLGQLCNDPRARAAVLADMDLVGKEAQLRGFEFAKAVTLVPEPFTMENGLLT
PTFKVKRPQAKEYFAKAISNMYAALSASDPKPPKL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggattcaccggctcaacgtcgtctcaaatctatccagagtcacatcctctcttccacc
accgctgatcaatccgacctccaagctaacctcacctcctcctcacagttcgttcaccgt
caacagtacagtgtttgtttaccggagaaattgcaaacagggaagtggaatgtttataga
tctgcacggtcgccaatgaagattgtaactaggtttcatgatcaccctgagatcgagaca
ttacatgataactttgtacatgctgttaaaacttttggagattacaagtacttgggcaca
cgagttcaggcagatggaatgattggagagtatacatggatgacatatggagaagctggt
gctgctagggaagctataggttctgcccttcgttttcatgggttacaaaagggagcttgc
attggactctattttataaacagaccagagtggttgattgtggatcacgcttgtacagca
tattcttatatttcagttcccttatatgacacacttggtcctgatgcagttaagtatgtt
gtgaatcatgctgatgtgcaagctatcttctgtgtcccagagacattgaacaccctgctt
agcttcatatccgagattccatctgtacgacttatagtggtagtgggaggtgtagatgaa
cacttaccatcacttcctttggcatctggagtgaagctcagatcatatacaaaactgttc
agtgagggccgcagtagcctgcaaccttttatccctcctaaacctgaggatgttgccacc
atatgctatactagtggtactactggcacaccaaagggagttgtcttgacacataacaac
ttaatttcaagtgttgctggtttctgcatggcaatcaaattcaaccctgcagacatttat
atatcttatcttcctttggcgcacatatatgaacggagtaaccagatcgtgtcagtttac
tatggtgttgctgttggattctaccagggagacaatttgaaattgctggatgatttgtct
gctttaagaccaacaatattgtgtagtgttcctcggctgtataaccgtatatatgatgga
atcataaatgcggtgaaaagttctggggttttaaaggagaggctatttagagctgcctac
aactctaagaagcaagcgttgatgagtggccgaaatccatcaccaatgtgggaccgattg
gtatttaacaaaataaaggaaaagcttggaggacgagtgcggtttatgggatcaggtgct
tcacctttatctccagatgtaatggactttctgagggtgtgttttggctgtcaagtactt
gagggatatgggatgaccgaaacttcttgtgtcattagcagtgtggaccagggtgacaat
ttatctggccatgttgggtcgcctaatcctgcctgcgaaataaaactggtggatgttcct
gaaatgaattacacctctgaggatcagcctcatcctcgtggagaaatctgtgtcaggggt
cccactatcttccaaggctactacaaagctgaagtccaaatgagagaagtaatagatgat
gatggttggttgcatacaggagacattgggttgtggttacccggaggccgcctcaagatt
attgacaggaagaagaatattttcaagttggcacagggtgagtacatagcaccggagaag
gttgagaatgtgtatacaaaatgcagatttgtttcccagtgttttatatatggtgatagc
ttcaactcctcattagtggctgtagttgcagtggagccagatgtattgagagattgggcc
gtgtctgaagggatcaagcatgatgatttaggacagttatgcaatgatccaagagcaagg
gccgcagttcttgctgacatggatctggttggaaaggaagcacagttgagaggttttgaa
tttgcaaaagccgtaactttggtgcctgaaccattcaccatggagaatggacttctcacg
ccaacatttaaggtcaagaggcctcaagcgaaggaatactttgccaaagcaatatcaaac
atgtatgctgcactttctgcatcggatccgaagccgccgaagttgtag
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