KEGG   Populus trichocarpa (black cottonwood): 7485189Help
Entry
7485189           CDS       T01077                                 

Definition
(RefSeq) glutamate decarboxylase
  KO
K01580  glutamate decarboxylase [EC:4.1.1.15]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00250  Alanine, aspartate and glutamate metabolism
pop00410  beta-Alanine metabolism
pop00430  Taurine and hypotaurine metabolism
pop00650  Butanoate metabolism
pop01100  Metabolic pathways
pop01110  Biosynthesis of secondary metabolites
Module
pop_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    7485189
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    7485189
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    7485189
   00430 Taurine and hypotaurine metabolism
    7485189
Enzymes [BR:pop01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.15  glutamate decarboxylase
     7485189
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Pyridoxal_deC Aminotran_5
Motif
Other DBs
NCBI-GeneID: 7485189
NCBI-ProteinID: XP_002318327
UniProt: B9I4W8
LinkDB All DBs
Position
12
AA seq 501 aa AA seqDB search
MVISTAATDSDENLYSTFASRYVRTALPRFKMPENSMPKDAAYQVINDELMLDGNPRLNL
ASFVTTWMEPECNDLIMASINKNYVDMDEYPVTTELQNRCVNIIAHLFNAPVGEKETAVG
VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE
VKLTEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLSKKNKETGWNTP
IHVDAASGGFIAPFIWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKEDLPDEL
IFHINYLGSDQPTFTLNFSKGSGQIIAQYYQFIRLGFEGYKRIMENCLENARVLREGLEK
TGRFDIVSKDKGVPLVAFSLKDSSKHTVFEIAESLRRFGWIIPAYTMPANAQHIAVLRVV
VREDFNRSLAERLVSHIDQVMKETDSLPSRVAVQASRIVTVDETQDNMDGKKTVKKSSRE
IQEEVTLYWRRLASEKRTGAC
NT seq 1506 nt NT seq  +upstreamnt  +downstreamnt
atggtgatctctactgccgcaacagattccgatgagaatttgtactccacttttgcttcc
agatatgtacgcactgcacttcccaggttcaagatgccagagaattcaatgccaaaggat
gcagcgtaccaagtgataaatgatgagctgatgctggatgggaatccaaggctcaacttg
gcatcttttgtgacaacatggatggagcctgagtgtaatgatctcatcatggcttccatt
aacaagaattatgtcgacatggatgagtaccctgttaccacagagctccagaatcgatgt
gtaaatataatagcccacctgttcaatgctcctgttggagaaaaagaaactgcagttggt
gtcgggactgtgggatcatcagaggcaataatgctggctggattagcttttaaaaggaag
tggcagaataagaggaaagcagagggcaaaccgtacgataagcccaacatagtcacagga
gctaatgtgcaggtttgctgggagaaatttgcaaggtacttcgaagttgagctgaaggag
gtgaagctgacagaagggtattatgtgatggacccagtcaaagcggttgagatggtggac
gagaacacaatctgtgtggcagccattttgggatcaacacttactggagagttcgaagat
gtgaagcttctcaatgacctcctctccaaaaagaacaaggagactggttggaatacgcca
attcatgttgatgctgccagtggagggttcattgctcctttcatttggcctgatcttgaa
tgggactttcgtttgccattggtgaagagcatcaatgttagcggtcacaaatatggcctt
gtttatgctggtgttggttgggttgtgtggaggaccaaggaggacttgccagatgagcta
atatttcacatcaactaccttggatctgatcaacctactttcaccctcaacttttcgaaa
ggttcaggtcagataattgctcagtattatcagtttatacggcttggctttgagggttac
aaaagaataatggagaactgcctggagaatgcgagagtgctgagagaaggattagaaaaa
acagggcggtttgacattgtctccaaggataagggggtgcctcttgtggccttttctttg
aaggacagtagcaagcatactgtgtttgaaatagctgagagtttgagaaggtttgggtgg
ataatcccagcctatacaatgcctgctaatgcccaacacattgctgtcctccgtgtggtg
gtcagggaagacttcaatcggagtctggcggagagacttgtctcgcacatcgatcaagtc
atgaaggaaacagactcgcttcctagccgtgtcgctgttcaagcatcgcgcattgttact
gttgacgaaacacaagataacatggatggcaagaagactgttaaaaagagttcaagggag
attcaggaggaagtcaccctgtactggaggcggcttgccagtgagaagagaactggagcc
tgctag

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