Populus trichocarpa (black cottonwood): 7486729
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Entry
7486729 CDS
T01077
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04145
Phagosome
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
7486729
09142 Cell motility
04814 Motor proteins
7486729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7486729
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7486729
04147 Exosome [BR:
pop04147
]
7486729
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
7486729
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
7486729
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7486729
Exosomal proteins of colorectal cancer cells
7486729
Exosomal proteins of bladder cancer cells
7486729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_2
Tubulin_3
Misat_Tub_SegII
Motif
Other DBs
NCBI-GeneID:
7486729
NCBI-ProteinID:
XP_002318519
UniProt:
B9I2F1
LinkDB
All DBs
Position
12:complement(4410389..4412440)
Genome browser
AA seq
444 aa
AA seq
DB search
MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSELQLERVNVYYNEVSNGRYV
PRGVLMDLEPGTMDSIRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISGTMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYLSITVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINAQNKNSSYFVEWIPNNVKSSVCDIPPNG
LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA
EYQQYQDATAEEEIEYEEDDGVEN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattcttcacattcaaggagggcaatgcgggaaccaaattggatcaaaattc
tgggaggtggtctgtgatgagcatggcattgatcccaccggccggtacgtcggaaattcg
gagttacagctagagagagtgaatgtatattacaatgaggttagtaacggccggtatgtg
ccacggggtgtgcttatggaccttgagcctggcactatggacagtatcaggaccggtcca
tacgggcagattttccggcctgataacttcgtttttgggcaatctggggcaggaaacaat
tgggctaaaggccattacactgagggtgctgagctgattgattcagtccttgatgttgtc
aggaaagaggctgagaattgtgactgcttacaaggatttcaagtatgtcattccctagga
ggaggcactgggtctggaatgggaactttgctcatctcaaaaatcagagaagagtatcca
gatagaatgatgctcacattctctgtgttcccatctcccaaagtgtcagacacggttgtg
gagccatacaatgctaccctctctgttcatcaactggtggagaatgctgacgaatgtatg
gttcttgataatgaagcactctatgatatttgcttcaggactctcaagctcactacccca
agctttggagacttgaatcatctgatttcaggaacaatgagtggtgttacttgttgcttg
cgctttccgggtcagcttaactcagacctgagaaaactagctgtgaacttaatcccgttc
ccgaggcttcacttcttcatggtggggtttgctcctctgacatctagaggatcacagcag
tacctttctatcactgtccctgagctgacccaacaaatgtgggatgccaagaacatgatg
tgtgcagctgatcctcgacatgggcgttacctcacagcatcagctatgtttagaggcaaa
atgagcaccaaagaagtcgatgagcaaatgatcaatgcgcagaacaagaactcttcttat
tttgtggaatggataccaaacaatgtcaagtctagtgtttgtgatatccctccaaatggg
ctttcaatggcttcaactttcataggcaattcaacttccatacaggagatgtttaggaga
gtgagtgagcagttcacggcaatgtttaggagaaaggccttcttgcattggtacacaggg
gaaggaatggatgaaatggagttcactgaagctgagagcaatatgaatgatcttgtggcc
gagtaccaacagtaccaggatgccactgctgaagaagaaattgagtatgaggaggatgat
ggagttgaaaactga
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integrated database retrieval system