Populus trichocarpa (black cottonwood): 7487863
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Entry
7487863 CDS
T01077
Name
(RefSeq) isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00020
Citrate cycle (TCA cycle)
pop00480
Glutathione metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01210
2-Oxocarboxylic acid metabolism
pop01230
Biosynthesis of amino acids
pop04146
Peroxisome
Module
pop_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
7487863
09106 Metabolism of other amino acids
00480 Glutathione metabolism
7487863
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7487863
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
7487863
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Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-GeneID:
7487863
NCBI-ProteinID:
XP_002298528
UniProt:
B9GHS2
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Position
1:complement(35922297..35928741)
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AA seq
503 aa
AA seq
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MQRVCSSGAAAQNIIITIKLGAMPGVAAAANTIRRNPNFFHFSSISRNYGNGISGGAFVK
NRVTFSSPASHITRALSLRCFSSSSSSSSGFDRVQVQNPIVEMDGDEMARIIWKMIKDKL
IYPYLDLDIKYFDLGILNRDATDDKVTVESALAALEYSVAVKCATITPDEARVKEFGLKS
MWRSPNGTIRNILNGTVFREPILCRNIPRIVPGWKKPICIGRHAFGDQYCATDTIIPGPG
KLKMVFVPEDGEVPVELDVYNFKGPGIALAMYNVDESIRNFAESSMSLAFAKKWPLYLST
KNTILKKYDGRFKDIFQEVYEEKWKQKFEENSIWYEHRLIDDMVAYALKSEGGYVWACKN
YDGDVLSDLLAQGFGSLGLMTSVLLSSDGKTIEAEAAHGTVTRHFRLYQKGQETSTNSIA
SIFAWTRGLEHRAKLDNNERLLDFALKLEASCIGTVEAGEMTKDLAILTHGPRVSREFYL
NTEEFIDAVARNLETKLQEPAVV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagagtctgtagtagcggtgctgctgctcagaatataataataacaatcaaacta
ggtgcgatgccgggagttgctgctgctgctaacacaataagaagaaaccctaacttcttc
catttctcttccatttctcggaattacggaaatggaatatcagggggtgcttttgtcaag
aatcgtgtcaccttttcttctcctgcttctcacatcactcgcgccctttcgcttcgatgt
ttctcttcttcttcttcttcttcaagtggctttgatcgggttcaagttcaaaatcccatc
gttgaaatggacggtgatgaaatggcgaggataatttggaaaatgataaaagacaagctt
atatatccttatctggatttggatatcaagtattttgatttgggtatattgaatcgtgat
gctactgatgataaggtcactgtagaaagtgctcttgcggctctcgagtacagtgttgct
gttaagtgtgctacaataactcccgatgaggctagagttaaagaatttggcctgaagtct
atgtggaggagtcctaatggcaccattagaaacatcttaaatggtactgttttccgtgaa
cctatcctctgtcgaaacattccaagaattgttcctggttggaagaaacccatatgcatt
ggtaggcatgcctttggtgatcaatattgtgccacagatacaatcattccagggccagga
aagcttaaaatggtttttgtcccagaagatggtgaagtcccagtggagcttgatgtttat
aatttcaaaggcccaggcatagctcttgcaatgtataatgttgatgagtctattcgaaat
tttgcggagtcatcaatgtcattggcatttgcaaagaagtggcctctttacttgagcacc
aaaaacactattctgaagaaatatgatggcaggtttaaggacatattccaggaggtatat
gaagaaaagtggaagcagaagtttgaagaaaattcaatatggtatgagcatcggctaatt
gatgacatggtagcttatgcattaaaaagtgagggcggatatgtctgggcttgcaaaaac
tatgatggagatgttctaagtgatttacttgctcaaggatttggctcactaggcctcatg
acctctgtattgttatcttctgatggaaagacaattgaagctgaggcagctcacgggact
gtaacccggcatttccggttgtatcaaaagggacaggaaaccagcacaaatagtattgct
tcaatatttgcatggacacggggtttagagcatagggccaagctggataacaatgaaagg
ttgcttgattttgctctcaagttggaggcttcatgcattggaactgtggaggcaggagaa
atgaccaaggatcttgccattttgacccatggcccgagggtatcaagggaattttatctt
aatactgaagagtttatcgacgccgttgctagaaatctagaaacaaagcttcaggagcca
gctgttgtctaa
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