Populus trichocarpa (black cottonwood): 7487972
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Entry
7487972 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial
KO
K01952
phosphoribosylformylglycinamidine synthase [EC:
6.3.5.3
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00230
Purine metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
7487972
Enzymes [BR:
pop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.3 phosphoribosylformylglycinamidine synthase
7487972
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Gene cluster
GFIT
Motif
Pfam:
GATase_5
AIRS_C
FGAR-AT_N
FGAR-AT_linker
Motif
Other DBs
NCBI-GeneID:
7487972
NCBI-ProteinID:
XP_002312111
UniProt:
B9HMK5
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All DBs
Position
8:complement(3500092..3505298)
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AA seq
1452 aa
AA seq
DB search
MLCCLFFLLFIDIHTHTLFLSCLCFFFPYSFVSLYRSSVMAGTREITAATEFLLGNNRKT
LYVQRDLPINRRNQLLLGMLRGHRPAFGVSDKRSVSLRCRAQSKPRALVSGGVTSSVDEQ
SSLIEKPAQELIHFYRIPLIQESATLELLKSVQTKVSNKIVGLRTEQCFNIGIRSGISSQ
KLGVLRWLLQETYEPENLGTESFLEKKMKEGVNAVIVEAGPRLSFTTAWSANAVSICHAC
GLTEVTRLERSRRYLLYSKGVLQDYQINEFAAMVHDRMTECVYTQKLTSFETSVVPEEVR
YVPVMERGRKALEEINQEMGLAFDEQDLQYYTSLFREDIKRNPTTVELFDIAQSNSEHSR
HWFFTGKIIIDGQPMNRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGS
TCPLNASNRDLDILFTAETHNFPCAVAPHPGAETGAGGRIRDTHATGRGSFVVASTAGYC
VGNLNVEGSYAPWEDHSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMR
LPSGERREWLKPIMFSGGIGQIDHTHITKGEPDVGMLVVKIGGPAYRIGMGGGAASSMVS
GQNDADLDFNAVQRGDAEMAQKLYRVVRSCIEMGENNPIISIHDQGAGGNCNVVKEIIYP
KGAQIDIQAIVVGDHTMSVLEIWGAEYQEQDAILVKAESRDLLQSICKRERVSMAVIGTI
SGEGRVVLVDSSATEKCRSNGLPPPPPAVDLELEKVLGDMPQKSFEFHRVVSAREPLDIA
PDITVMDALMRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYT
DLTGGACAIGEQPIKGLVNPKAMARLAVGEALTNLVWAKITSLSDVKSSGNWMYAAKLNG
EGADMYDAATALSEAMIELGIAIDGGKDSLSMAAHAGGEIVKAPGNLVISAYVTCPDITK
TITPDLKLRDEGLLLHIDLAKGKRRLGGSALAQAFDQVGDDCPDLDDVSYLKKTFEFVQD
LITEEIISSGHDISDGGLLVCALEMTFAGNCGILLDLISKGXSLFETVFAEELGLVLEVS
RKNLDIVMQKLNSVGVSGEIIGRVTASPLIELKVDGVTQLKEETSFLRDIWEETSFHLEK
FQRLASCVDLEKEGLKSRHEPTWRLSFTPTFTDDKYMISTLKPKVAVIREEGSNGDREMS
AAFYAAGFEPWDITMSDLLNGVITLRDFIGIVFVGGFSYADVLDSAKGWSASIRFNQPLL
NQFQEFYERPDTFSLGVCNGCQLMALLGWVPGPQVGGVFGTGGDPSQPRFVHNESGRFEC
RFTSVTIEDSPAIMFKGMEGSTLGVWAAHGEGRAYFPDDGVLDRVIHSNLAPVRYCDDDG
NPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPTHWSLDKKGPSPW
LKMFQNAREWCS
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgctctgctgtcttttttttttattatttatagatatacatacacacactcttttcctg
tcttgcctctgtttttttttcccatatagtttcgtgagtttgtacaggtccagtgtaatg
gcgggtacccgagaaatcacagcagcaacagaattcttgcttggtaacaataggaaaacc
ctgtatgtacagagagatttgcctattaatcgacggaaccagttgctgttggggatgctt
cgtggtcataggcctgcgtttggtgtatctgataaaaggagtgtttcattgaggtgtcgt
gcgcaatcaaagcctagagctttggtttctgggggtgtgacgagttctgttgatgagcag
tcaagtttaattgaaaagcccgcgcaagaactgattcatttttatcgcattccgttgatt
caagagagtgcaactcttgaattacttaagtctgttcaaacgaaagtttcaaataagatt
gttggtttgcgaactgagcagtgctttaatatcgggattcggtctgggatttcaagccag
aagcttggggttcttaggtggcttctacaagaaacttatgagcccgagaatttggggact
gagagctttctcgagaagaagatgaaggaaggagtgaatgctgtgatagtcgaggctgga
cccaggttgtcttttaccacagcttggtctgcgaatgctgtgtcaatttgtcatgcttgt
gggttgacagaggttactagactggaacggtcaaggaggtacttactgtacagtaagggt
gtgttgcaagattatcaaatcaatgagtttgctgcaatggttcatgatcggatgactgag
tgtgtttatactcagaagcttacatctttcgaaaccagtgtagttccggaggaagttcga
tatgttcctgtcatggagaggggtagaaaagcattggaggagattaatcaggagatgggg
cttgcgtttgatgagcaagatttacagtattatactagtttgttcagggaggacatcaag
cggaatccgacaactgtggaattgtttgacattgcacaatctaatagcgagcatagcagg
cattggtttttcactgggaagattattatagatggacagcccatgaatagaactcttatg
cagattgtgaagagcacgttgcaggcgaatccaaataattctgtcattggtttcaaggac
aactcgagtgcaatcaaaggcttccctgtaaagcaattgcggccagttcagcccggctca
acatgtcccttaaatgcaagcaaccgtgaccttgatattttatttacagccgagactcat
aatttcccgtgtgcagtggcacctcaccctggggcagagacaggtgcagggggtcgaatt
agggatactcatgcaacaggtagagggtcatttgttgttgcatctacagctggttactgc
gttgggaatctgaatgttgaggggtcttatgcgccatgggaagatcattctttcacatac
ccatcaaacttggcatcacctttgcagattctcattgatgctagcaatggtgcttcagat
tatggaaacaaatttggggagcccttgattcagggctacactagaacttttggtatgcga
cttcctagtggggagaggcgggaatggttgaaaccaattatgttcagtggaggcataggg
caaattgatcacacccacataacgaaaggggaacctgatgttggcatgctggttgtaaag
attggaggtcctgcttatcgaattggaatgggaggtggggccgcatcaagcatggtgagt
ggccagaatgatgctgatcttgactttaatgctgtacagcgcggagatgctgaaatggca
cagaaactgtatcgtgttgttcgttcctgcattgagatgggggagaacaatccaatcatt
agtatccatgatcagggagccggtggtaactgtaatgttgtgaaggaaattatatatcca
aagggtgctcaaattgacatccaggcaattgttgttggtgatcacacaatgtctgttttg
gagatatggggtgcagagtatcaggagcaagatgcaattttggtgaaggctgaaagccgt
gacctcttgcaatcaatctgcaaaagggaaagggtgtcaatggctgttatcggaactatt
agtggcgagggacgtgttgtcttggttgatagttcagctactgagaaatgtcgttcaaat
ggactccctccccctcctcctgcagtggatcttgagcttgagaaagttcttggggacatg
cctcagaaaagttttgagttccaccgggtggtttctgcacgagagccacttgatattgct
ccagacatcacagtgatggatgctttaatgagggtattaagacttccatctgtatgttca
aaacgattcttaacaacaaaagtggacaggtgtgtaacaggtcttgtagcacagcagcaa
actgttggtcctctgcaaattacacttgctgatgttgctgtcattgctcagacctatact
gacttgactggaggtgcctgtgccattggggaacaacctatcaaaggtctggttaatcca
aaggctatggcgaggttggctgttggagaagctctcacaaatctggtttgggcaaagatt
acttctctttctgatgttaagtcaagcgggaattggatgtatgctgccaagctgaatggg
gaaggagctgacatgtatgatgctgccacagctctttcagaagctatgattgaacttggc
attgctatcgatgggggcaaggacagtctctccatggcagcccatgcaggtggtgagatt
gttaaggccccaggaaatctcgttatcagtgcttatgtcacttgccctgacataacaaaa
acaattacccctgatctgaagttgagagatgagggtttacttcttcacattgatctggcc
aagggaaagaggcgcctgggtggatctgcacttgctcaggcttttgaccaagttggcgat
gactgcccagatcttgacgatgtttcttacctgaaaaaaactttcgagtttgtgcaggat
cttattactgaagaaataatctcttctggccatgatattagtgatggtgggctactggtc
tgtgccctggagatgacatttgctgggaattgtggtattcttttggacttgatttcaaag
gggnagagcctctttgaaacagtctttgcagaagagcttggtcttgttcttgaagtcagc
agaaaaaacttggatattgtaatgcaaaagctcaatagtgttggggtttctggcgagatt
attgggcgagtgactgcctcacccttgatagaattgaaagttgatggggtgactcaattg
aaggaggaaacatctttccttagagacatttgggaggaaaccagtttccatctggagaaa
tttcagagattagcttcttgtgtggacttagagaaggaaggtttaaagtctaggcatgaa
cctacctggagattgtccttcactcctacctttacagatgataaatatatgatctcaaca
ttgaagccaaaagtagctgtcattcgagaggaaggcagcaatggagatagagagatgtct
gcagctttttatgctgctggttttgaaccctgggatattacaatgtcagaccttctgaat
ggagttatcactcttcgtgatttcattggtatcgtgtttgtgggtggctttagctatgcc
gacgtgcttgattctgcaaaaggttggtctgcttccatacggtttaaccagcctcttttg
aatcaatttcaagagttctacgaacgaccagatacttttagtcttggtgtatgcaatggg
tgtcagctcatggctctattggggtgggtcccaggtccccaagttgggggtgtgtttggt
actggaggagacccatcacaaccaaggtttgttcacaatgaatctggtcggtttgaatgc
cgctttacaagtgtgacaatagaggactcgcccgctatcatgttcaaaggaatggagggt
agcacattgggtgtgtgggcggctcatggtgagggaagagcatatttccctgatgatggt
gtacttgatcgtgtgattcattcaaatttggccccagtaagatactgtgatgatgatggg
aatccaacagaagtttaccctttcaacgtcaatggctctcctttaggagttgcagcaatt
tgttctcctgatgggaggcatcttgcaatgatgcctcatcctgagcgttgcttcttgatg
tggcaattcccttggtaccccacgcattggagtttggacaagaaaggccctagcccgtgg
ttaaagatgttccagaatgccagagaatggtgctcttga
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