Populus trichocarpa (black cottonwood): 7489286
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Entry
7489286 CDS
T01077
Name
(RefSeq) myosin-12 isoform X1
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
7489286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7489286
04131 Membrane trafficking [BR:
pop04131
]
7489286
03029 Mitochondrial biogenesis [BR:
pop03029
]
7489286
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7489286
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
7489286
mRNA cycle factors
P-body specific factors
7489286
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
7489286
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
7489286
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
7489286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
AAA_22
nSTAND3
AAA_16
AAA_6
DUF3138
TSC22
CbiA
Motif
Other DBs
NCBI-GeneID:
7489286
NCBI-ProteinID:
XP_024464823
LinkDB
All DBs
Position
9:3694968..3706694
Genome browser
AA seq
1559 aa
AA seq
DB search
MGTPVNIIVGSHVWIEDPEEAWLDGEVTEIKGRDATITTSNGKTIVADISSIYPRDTEAP
PAGVDDMTKLAYLHEPGVLHNLACRFALNEIYTYTGNILIAVNPFRRLPHLYDVHMMEQY
KGAAFGELSPHLFAVADTCYRAMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRS
AGSEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKHGKISGAAVRTYLL
ERSRVCQVSDPERNYHCFYMLCSAPPEDVKKYKLGDPRTFHYLNQTNCYEVANVDDAREY
LETRNAMDIVGISQDEQDAIFSIVAAILHIGNIDFVKGKEADSSKLKDDKSLYHLRTAAD
LLMCDEKALEDSLCKRVIVTPDGNITKPLDPDLAVLSRDALAKTVYSKLFDWIVDKINSS
IGQDPNAASLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTREEI
NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPK
LARTAFTINHYAGDVTYQADHFLDKNKDYVVAEHQALLDASKCPFVANLFPPLPEETSKQ
SKFPSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEA
IRISCAGYPTKRTFDEFLDRFGMLAPDVLDGSDEKSACVSILDRMGLKGYQIGKTKVFLR
AGQMAELDARRAEILANAVRRIQRQIRTYLARKEFITLRRATIHLQKLWRAQLARKIYEH
MRKEAASIRIQKNVRAHRARTFYTNLQASAKAIQTGMRAMAARNEYRYRRRTKAATVIQT
RWRRYHSLSAYKQHKIATLALQCLWRARTARKELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLEFEKHLRLDLEEAKGQEIAKLQGSLNEMQGQLDEAHAAIIHEKEAAKLAIEQAPP
VIKEVPVVDNTKLELLKNQNDELENELSELKKKMEEFENKCSELEKESKARAIEAEESHL
KTMKLQDTIERLELNLSNLESENQVLRQQALDASTNEDLSEELKILKSKIAELESENELL
RKQPAIVEQVANPERILPQVKSFENGHQTEEEPQMTKESGPPISLLTTQRPLTDRQQENH
DVLIKCLTEDKRFDETRPVAACVVYKSLLQWRSFEAEKTTIFDRIIHTIRSSIESQDNIT
DLAYWLSTTSTLLYLLQNTLKASNTTKISSQRNRTSPATLFGRMALGFRSSSVGMGMSSG
YSGMVGKGNDQSKVEAKYPALLFKQHLTAYVEKIYGLIRDSVKKEIGPFLNLCIQAPRSI
RARSIRGSSKNIHLSIVAKQQSSNIHWQSIVNKLDQTLGIMTENHVPPVFTRKIFSQVFS
FINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCLKASDQFAGSSWDELRHIRQAVGF
LVSHQKAQKSSDEITNELCPMLSIPQIYRIGTMFLDDKYGTQGLSSDVIGRMRALMAEDS
ISMPNNTFLLDVDSSIPFSMEEIFGSLSAIHLSNMDPPPLLRQRSDFHFLLQETQTETA
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccccggtaaacatcatagttggatcgcatgtttggattgaggatcctgaggaa
gcatggttggatggtgaagttacagaaatcaagggcagagatgccaccattactacctca
aatggaaaaactatagttgcagatatttcaagtatatatccaagagacacagaggcgcca
ccagcaggagtcgatgacatgacgaaattagcatacctccatgaaccaggagtcttgcat
aaccttgcttgccggtttgcactcaatgagatatatacttacactgggaacattctaata
gcggtaaatcctttccgaagactaccacatctgtatgacgtccacatgatggagcagtac
aagggagctgcatttggagagctaagtccacacctttttgctgtggcagacacttgttac
agagcaatgataaatgaacagggcagccagtccatcttggtaagtggagagagtggagct
ggtaaaacagagacaacaaagatgctcatgagatacctcgccttcatgggggggagatct
gcaggtagcgaaggaagaacagtagaacaacaagttttggagtccaatccagtattggaa
gcatttgggaacgcaaaaactgtcaaaaacaacaattcgagtcgatttggcaagtttgtt
gagatacaatttgacaagcatgggaaaatatctggagctgcagttcgtacttatcttctc
gaaagatcacgtgtttgccaagtctctgacccagagagaaactaccattgtttttacatg
ctctgttcagcaccaccagaggatgtcaagaaatacaagttaggggacccgagaactttc
cactatttaaatcaaacaaactgttacgaagttgcaaatgtagatgatgcaagggagtat
ttggagaccagaaatgcaatggatattgtcgggatcagccaggatgaacaggatgctata
ttcagcatagtagctgcaatccttcatatcggaaacattgactttgtgaaagggaaggaa
gcggattcttctaaacttaaggatgataaatcactctaccatcttcgaacagcagcagac
ctactgatgtgtgatgagaaggcactggaagactcactttgtaagcgggttatagtgact
ccagatggtaacattacaaaacctctggacccagatttagctgtcctaagtcgtgatgcc
ttggccaagaccgtatactcaaagctgtttgactggattgtagacaagatcaatagttca
atcggtcaagatcctaacgcagcaagcttaattggagtccttgatatttatggctttgaa
agcttcaagatcaacagttttgagcagctctgtatcaacttgacaaatgagaagttacaa
cagcattttaaccagcatgtattcaagatggagcaagaagagtatacacgggaggagata
aactggagctatgtagaattcgtagacaaccaggatgttttggatcttattgagaagaaa
ccgggaggtattatagcccttcttgatgaagcctgcatgtttcccaagtcgacccatgag
acatttgcacaaaagatgtaccagacatataaagctcacaaacgcttcagcaagccgaaa
cttgctcgaacagccttcacaatcaatcattatgcgggagatgttacataccaagcagat
cattttcttgacaaaaataaagattatgttgtagcagaacatcaagctctattagatgct
tccaagtgtccttttgttgctaaccttttccctccactgcctgaagagacatctaagcaa
tccaagttcccttcaattggtacccgcttcaagcaacaattacaagctttgatggagaca
ttgaacacaacagaaccacattacatcagatgtgtaaagccgaatacagtactaaagcct
ggaatctttgagaacttcaatgtcttgaaccaactaagatgtgggggagtactagaggcg
attaggataagttgtgctggttatcctaccaaaagaacatttgatgagttccttgatcgt
tttggaatgctggctcctgatgttctagatggatctgacgaaaaatcagcatgcgtttcc
atcttggacaggatgggtttgaagggctatcagattgggaaaacaaaggtgttcctcaga
gctgggcagatggctgagttagatgcacgaagagctgaaattttggctaatgctgtcagg
cgaatccagagacaaatccgaacatatctggccagaaaagagttcatcaccctaagaaga
gctacaattcatttgcagaaactctggagagcacaacttgcccgtaagatatatgaacat
atgaggaaggaagcagcttctatccgtatacaaaagaatgtccgtgctcatagagcaaga
acattttacactaacttgcaagcatcagcaaaagctatccaaactggaatgcgagcaatg
gcagcacgtaatgaatacagatacagaagaagaaccaaggctgcaactgtaattcagact
cgatggagaagataccattctctttctgcgtataagcagcataagatcgcaactctagca
ttgcaatgtctttggagagcaaggacagctaggaaggagcttagaaagctcaaaatggct
gcaagagaaactggggcactaaaggaagctaaggacaagctagagaagcgagttgaagag
ctaacatggcgactagaatttgaaaagcacttgaggcttgatcttgaagaagctaaaggg
caagaaattgcaaaactgcaaggttcattaaatgagatgcaaggtcaactagatgaagcc
catgccgcaataatccatgaaaaagaagcggcaaagttagctatagaacaagctccaccg
gttatcaaagaggtgccagttgtggataacaccaagctggagttactcaagaaccagaat
gatgaattggagaatgagctaagtgagctgaagaagaagatggaggaattcgagaataag
tgttctgaacttgagaaagagagcaaagcaagagctatagaggctgaagaatcacacctg
aaaacaatgaaacttcaagacaccattgaaagattggaattaaatttgtccaacctcgaa
tcagagaatcaagttttacgacagcaggctttggatgcatcaacaaatgaggatctctct
gaagaattaaaaatactcaagagtaagattgcagagctggagtcagagaatgaattgctc
cgcaaacaaccagcaattgtggaacaggtagcgaatcctgaaaggattctgcctcaagtc
aagagttttgagaatggacatcaaacagaagaagagcctcaaatgacaaaggaatccggg
cctcccatctccctcttaactacacaaagacccctaacagacaggcagcaggaaaaccat
gatgtacttatcaagtgtcttacagaagataagcggtttgatgagaccagacctgttgcc
gcctgtgttgtgtataaatcacttcttcagtggagatccttcgaagcagagaagacaact
atatttgataggattattcacacaattcgatcatcaatagagagtcaagacaacatcact
gatctagcatattggctatcaacaacttctacccttttgtatctgcttcaaaatactctt
aaagcaagcaatacaaccaaaatatcttcacagcgcaaccgaacatcccctgccacctta
tttggtagaatggcactgggattccgttcatcttcagttggcatgggaatgtcaagtggg
tacagtggaatggtgggaaaaggaaatgatcaatcaaaagtggaagctaagtacccagca
ctgctgtttaagcaacatctgactgcatacgttgagaaaatatatgggctgatcagagac
agtgttaagaaagagattggtccatttttgaatttgtgcatccaagctccaagatccata
agagctagatcaataagagggtcgtccaaaaatatccatttgagtattgttgccaaacag
caatcgtcaaatatacactggcaaagcattgtcaataagctagatcagaccttgggcata
atgacagagaaccatgtccctcctgtgttcacaaggaaaatctttagtcaggttttctca
ttcataaatgtacagctctttaatagcttattgcttcgtcgtgagtgctgctcatttagc
aatggagagtatgtaaaggctggtttgcaggaattggaacagtggtgtctcaaagcatca
gatcagttcgcaggatcgtcatgggatgaactccgacacataagacaagctgttgggttt
ctggtttcgcatcaaaaggctcaaaaatcttcggatgagatcacaaatgaactctgccca
atgttgagcattccacaaatatatcgcattgggactatgttcttggatgacaaatatgga
actcagggattatcttcagatgtgattggcagaatgagagccctaatggcagaagattca
ataagcatgcctaataatacattcttacttgatgttgattcaagcatacctttttcaatg
gaagagatattcggatccttgagtgcaatccacttatccaacatggatcctccaccgcta
ctccgtcaaagatctgatttccattttttattgcaggaaacacagacagaaacagcctaa
DBGET
integrated database retrieval system
