Populus trichocarpa (black cottonwood): 7489379
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Entry
7489379 CDS
T01077
Name
(RefSeq) phosphoenolpyruvate carboxylase 4 isoform X2
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00620
Pyruvate metabolism
pop00710
Carbon fixation in photosynthetic organisms
pop01100
Metabolic pathways
pop01200
Carbon metabolism
Module
pop_M00168
CAM (Crassulacean acid metabolism), dark
pop_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
pop_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
pop_M00172
C4-dicarboxylic acid cycle, NADP - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
7489379
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
7489379
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
7489379
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Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
MAGI_u5
Motif
Other DBs
NCBI-GeneID:
7489379
NCBI-ProteinID:
XP_002314894
UniProt:
B9HWN8
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Position
10:14790467..14802016
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AA seq
1060 aa
AA seq
DB search
MTDITDDIAEEISFQGFDDYCKLLKNLLNDVLQREVGTEFVDKLERNLTLAQSACNLRLA
GIEDTAELLEKQLASEISKMTLEEALTLARAFSHYLNLMGIAETHHRARKTRNLANLSKS
CDEVFNQLLHGGKSGDELYASVCMQEVEIVLTAHPTQINRRTLQYKHVRIAHLLEYNDRP
DLTQEDREILIEDLVREITSIWQTDELRRHKPTPVDEARAGLHIVEQSLWKAVPHFLRRV
SNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTRDVSLLSRWMAIDLYIREVD
SLRFELSMTRCSDKLSREAHEILERETSPEDRHESWNQPTSRNQTKLHQHAPPLPTQLPA
RADLPACTECGDDGGSHPKLELPGTDYMPLSRQDVQGSSNSESSFHKSGHGSSKSIANGS
IANSNGHQSAPSPRGSFTSSQLLAQRKCFAESKIGRSSFQKLLEPSPPERPGIAPYRIVL
GHVKDKLMKARRRLELLLEDLPCEHEPWDYYETTDQLLEPLLLCYESLQSCGAGVLADGR
LVDLIRRVATFGMVLMKLDLRQESGRHSEALDAITKYLDMGTYSEWDEEKKLEFLTRELK
SKRPLVPPTIQVAPDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARL
AVSGELGRPCPRGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYSEHIVKNHNGHQEVMVG
YSDSGKDAGRFTAAWELYKAQEDVAAACKDHKVKVTLFHGRGGSIGRGGGPTYLAIQSQP
PGSVMGTLRSTEQGEMVQAKFGLPHTAVRQLEIYTTAVLLATLKPPELPREEKWRNLMDE
ISTISCQSYRSTVYENPEFLAYFHEATPQAELGFLNIGSRPTRRKSSTGIGHLRAIPWVF
AWTQTRFVLPAWLGVGAGLKGVCEKGHTQELKAMYKEWPFFQSTIDLIEMILGKADIHIA
KHYDEVLVSDKKRRELGAELRRELLTTEKCVLVVSGHEKLSENNRSLRRLIESRLPYLNP
MNLLQVEILKRLRSDDDNHKLRDALLITINGIAAGMRNTG
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgacggacataacagacgatatagctgaggaaatctccttccaaggatttgatgattac
tgtaaactgcttaaaaatttattaaacgatgtgttgcagagagaagttggtactgaattc
gtcgacaaacttgaacgcaacctcactctcgctcagagtgcttgtaatttgagattggcg
ggaatagaagacactgccgagttgctggagaagcagctcgcgtcagagatatcaaaaatg
acattagaggaagcattgacacttgctcgtgcttttagccattatcttaatttgatggga
attgctgagacccatcacagggcacgtaagacaaggaatttggcgaatctatcaaaatct
tgtgatgaagtctttaatcagctgttgcacggtggaaaatcgggtgatgaactttatgcc
tctgtttgcatgcaggaggttgaaattgttcttactgcacatcccactcaaattaatcgc
cgtactttgcaatacaagcatgttagaattgctcatcttttagaatacaacgatcgacct
gatcttacacaggaagatagagaaatccttattgaagatttggtaagagaaattacttca
atatggcagacagatgagcttaggcgccacaaacctacaccagtagatgaagccagggct
ggcttgcacattgtggagcagtctctatggaaagcagtacctcattttttacgacgtgtc
agtaatgcactaaagaagcatacaggaaagccacttccattaacttgcacgccaataaaa
tttgggtcttggatggggggtgatagagatggaaatccaaatgtaacagcgaaggtaaca
cgagatgtctctctcttatcaaggtggatggctattgacctttacattagagaagttgat
agtctcagatttgaactgtccatgactcgctgcagtgataagttgtcaagagaggctcat
gaaattctagagcgagaaacttcaccagaggatcggcatgagagttggaatcaacccaca
agcagaaatcaaacaaagcttcatcagcatgctccaccacttcccacacaacttccagct
agagctgatcttcctgcctgcactgaatgcggtgatgacggtggttcacatcccaaacta
gaacttccagggactgattacatgccattgagtcgtcaggatgttcagggttcttcaaat
tcagaatcttcattccacaagtctggtcatggttctagcaaatcaattgctaatggaagc
attgctaattctaacggccatcaatcagctccaagtccacgtggatctttcacctccagt
caactccttgctcagagaaaatgttttgcagaatctaagataggaagatccagcttccag
aagcttctagagccaagtccacctgaacgtcctggaatcgctccttatagaattgttctt
ggccatgtgaaagataagcttatgaaggctagaagacgtctggaacttcttcttgaggat
cttccctgtgaacatgagccttgggattactatgagacaacagaccaattgttggaacca
ctgcttctatgctacgagtctctgcaatcttgtggagctggggtgcttgcagatggccgg
ctggttgacctgataagaagagttgcgacttttggaatggtattaatgaagcttgacttg
cgtcaggaatctggtagacattctgaagcactagatgcaatcaccaaatatttggatatg
ggaacatatagtgagtgggatgaagaaaagaaactggaattcctaacaagagagctcaaa
agcaagaggccactagttcctcccaccattcaggttgctcctgatgttaaagaagtcttg
gatacattccgtgttgctgctgagctagggagtgattcacttggagcatatgtgatctct
atggcatccaatgcgagcgatgtccttgctgtggagcttttacaaaaagatgcccgtctt
gctgttagtggcgagctagggagaccatgtcctagaggaacgctgcgggtggttccattg
tttgaaactgtgaaagatcttagaggggctggttcggttatcaggaaattattatcaatt
gattggtactcagagcacattgtaaagaaccataacgggcatcaggaggtgatggttgga
tattctgattctggtaaagatgctgggcggttcactgctgcatgggaactttacaaagcc
caagaggatgttgcggcagcttgcaaagatcataaagttaaagtaactctattccatggg
cgaggagggagtatcggtcgtggtggtggaccgacatatcttgccattcaatcccaacca
ccaggttcagtgatgggtactcttaggtcaactgagcaaggagaaatggtgcaagccaag
ttcgggctgccacacacagctgttagacagttagagatatacacaactgcagttctgctt
gcaacattaaaacccccagagctacctcgagaagaaaaatggcgtaatctcatggatgag
atttcaacaatcagctgccaaagttaccggagcacagtatatgaaaacccggaatttctt
gcctactttcacgaggctactccacaagctgagcttggtttccttaacataggaagccgg
cccacaagaagaaagagctcaacaggaatcggacatcttcgtgccattccatgggtattt
gcgtggacccaaacaagatttgttcttccagcctggctaggagttggggcaggtttgaag
ggtgtttgtgagaagggacacactcaagagttgaaagcaatgtacaaagaatggcctttc
ttccaatctaccatagacctgatagagatgattctggggaaggcagacattcatatagcg
aagcactatgatgaagtgctcgtatctgataagaagaggagagaacttggtgctgaatta
agaagggagctcttaacaactgagaagtgtgtattggtggttagtgggcatgagaagttg
tcggaaaacaaccggagcttgaggcggcttatcgagagcaggctaccgtatcttaatcct
atgaatttgttacaggttgagattctaaagaggttgagaagtgatgatgacaaccacaaa
ctcagagatgctctgcttattactataaatggtattgctgctgggatgaggaacacaggt
tga
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