Pseudomonas oryzihabitans: APT59_03615
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Entry
APT59_03615 CDS
T04267
Name
(GenBank) LuxR family transcriptional regulator
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
por
Pseudomonas oryzihabitans
Pathway
por02020
Two-component system
por02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
por00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APT59_03615
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APT59_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
por03000
]
APT59_03615
Transcription factors [BR:
por03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
APT59_03615
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ALZ83330
UniProt:
A0A0U4WDW1
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All DBs
Position
784563..785327
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AA seq
254 aa
AA seq
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MHADLFAVSSRLAGLPTLDACLDTVQDAAERLGCKALIYDYAPVPLSHDGVLITPSVFKV
RNTPADMQAFWCERGYYQIDPVQQCASRRAAPFVWSFRSETRSALREYLGDSHRPVTCYV
RDSGLATGVTVPLHLPGGAFATLTGILDADARDAEATGEACLSAFLVLAHAFQARADELL
APAERCCGQIRLTPRERECLQYSAKGLTAKRIAATLHRSTATVNLHLNSAARKLGARNRV
EAVVRGLHYRLVEV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccgatctgttcgccgtcagtagccgactcgccgggttgcccacgctcgacgcc
tgtctggataccgtccaggacgccgccgagcgtctgggctgcaaggcgctgatctacgac
tacgcaccggttccgctcagtcatgacggggtactcatcacgccgtcggtgttcaaggtg
cgcaacaccccggcggacatgcaggccttctggtgcgagcgcggctactaccagatcgat
cccgtgcaacagtgcgccagccgccgcgcggcgcccttcgtctggtcgtttcgcagcgaa
acccgcagcgcgcttcgcgagtacctgggtgacagtcatcggccggtcacctgctatgtg
cgcgacagtggcctcgccaccggggtaacagtgccgctgcaccttcccggcggcgccttc
gccaccctgaccggcatcctcgatgccgatgcccgcgatgccgaggccaccggcgaagcc
tgcctgagtgccttcctggtgctggcccatgccttccaggcccgcgccgatgaactgctc
gcgcccgccgagcgatgctgcggccagatccgcctgacgccacgggagcgcgaatgcctc
cagtattcagccaaggggctgaccgccaagcgcatcgccgcgacgctccatcgctccact
gccacggtcaacctgcacctcaattccgccgcccgtaaattgggtgcgcgcaatcgggtg
gaggcggtggtgcgtggcctgcactatcggctggtggaagtctga
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