Pseudomonas oryzihabitans: APT59_06000 Help Entry APT59_06000       CDS       T04267                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism por  Pseudomonas oryzihabitans Pathway por02020   Two-component system por02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:por00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     APT59_06000  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     APT59_06000  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:por03021]     APT59_06000 Transcription machinery [BR:por03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      APT59_06000 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR RRP4_S1 Motif Other DBs NCBI-ProteinID:  ALZ83780 UniProt:  A0A0U4WXE6 LinkDB All DBs Position complement(1340348..1341823) Genome browser AA seq 491 aa AA seqDB search MGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGEDFDQSEASGESDEH ANSGNMETTFKETSVATNELADESEWSERIPSDSELPVDTAWEDIYQTSASSLPSSDDDE WDFTTRTSAGESLQTHLLWQLNLAPMSDLDRLIALAIIDGIDTDGYLQESLEDIHASLDP DLEVDLDEVEVVLRRVQQFEPAGVAARNLRECLLIQLAQLPATLPLLGEAKRLVGDYLDL LGSRDYAQLMRRMKIKEDELKPIIELIQTLHPRPGSQIESGEAEYVVPDVIVRKHNERWL VELNQESMPRLRVNPQYAGFVKRADSSADNTYMRNQLQEARWFIKSLQSRNETLMKVATQ IVEHQRGFLEYGEEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYELKYFFSSH VSTAEGGECSSTAIRAIIKKLVAAENAKKPLSDSKIAGLLESQGIQVARRTVAKYRESLG IAPSSERKRLL NT seq 1476 nt NT seq  +upstreamnt  +downstreamnt atgggccagcagctgacgatgacgccgcagctgcaacaagccatacgtctgctccagctc tcgacgctcgatttgcagcaggaaatccaggaagccctggaatccaatccgatgctggaa cgccaggaagacggggaagacttcgaccagagcgaagcctcgggcgaaagcgacgagcac gcgaactccggcaacatggaaaccaccttcaaggaaacctcggtcgccaccaacgagctg gccgacgaatccgagtggagcgagcgcatccccagcgacagcgagctgccggtcgacacg gcctgggaagacatctaccagaccagcgccagcagcctgcccagcagtgacgacgacgag tgggacttcaccactcgcacctcggcgggcgagagcctgcagacgcatctgctctggcag ctcaacctggcacccatgtcggacctcgatcggctgatcgcgctggccatcatcgatggc atcgataccgacggttacctgcaggaaagcctcgaagacatccatgcctcgctcgacccg gacctggaagtcgatctcgacgaagtcgaggtggtgctccgacgggtccagcaattcgag cccgccggcgtcgccgctcgcaatctgcgcgaatgcctgctgatccagctggcgcaactg ccggccaccctccccttgctcggcgaggccaagcgcctggtcggtgactacctggatctg ctcggcagccgcgactacgcgcagctgatgcggcgcatgaagatcaaggaagacgaactc aagccgatcatcgagctgatccagacgctgcatccgcggcctggctcccagatcgagtcc ggcgaagccgaatacgtggtaccggacgtcatcgtgcgcaagcacaacgagcgctggctg gtggagctcaatcaggaatccatgccgcgcctacgggtgaatccccagtatgcgggcttc gtcaaacgcgccgacagcagcgccgacaatacatacatgcgcaatcagctgcaggaagcg cgctggttcatcaagagcctgcagagccgcaacgagaccctgatgaaggtggcgacccag atcgtcgagcaccagcggggttttctcgaatacggcgaagaggccatgaagccgttggtc ctgcacgacatcgccgaggcggtgggcatgcacgagtcgaccatctcccgggtgaccacc cagaagttcatgcacaccccgcgtggcatctacgaactcaagtatttcttctccagtcac gtcagcaccgccgaagggggcgaatgctcctccaccgcgatccgcgcgatcatcaagaaa ttggtagcggcggaaaacgcgaaaaagccgttgagtgacagcaagatcgctggtttactg gaatcgcaaggtatacaagtcgctcgtcgcacggtggctaagtatcgggaatccctgggt atcgctccgtccagcgaacgcaagcgtctcctctga

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