Pseudomonas oryzihabitans: APT59_06195
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Entry
APT59_06195 CDS
T04267
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
por
Pseudomonas oryzihabitans
Pathway
por03030
DNA replication
por03430
Mismatch repair
por03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
por00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APT59_06195
03430 Mismatch repair
APT59_06195
03440 Homologous recombination
APT59_06195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
por03032
]
APT59_06195
03400 DNA repair and recombination proteins [BR:
por03400
]
APT59_06195
Enzymes [BR:
por01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APT59_06195
DNA replication proteins [BR:
por03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APT59_06195
DNA repair and recombination proteins [BR:
por03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APT59_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ALZ83817
UniProt:
A0A0U4XRG9
LinkDB
All DBs
Position
1380029..1383550
Genome browser
AA seq
1173 aa
AA seq
DB search
MSASFVHLRLHTEYSLVDGIVRVKGLVKAAEAAGMPAVAVTDQGNLCSLVKFYKAAMGAG
IKPIAGADIWMAGRDGNAPLSRMTLLVMNAKGYRNLTELLSRGFQEGQQDGQIVIQRDWV
KEACEGLIALSGSKEGEIGLALLEGDLALADQLFEEWQQVFQDRFYLEIQRTERAGDEEH
LHAAVALADRCGGALVATNDVRFLKAEDFEAHETRVCIGEGRPLDDPRRERKYSDQQYLK
SAAEMAELFSDLPEALENTVEIAKRCNIEIQLGKYFLPNFPIPNGMTINDYLRHVSFEGL
EERLAVLWPRETTPNYEEKRQEYVDRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIEYV
ADLYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLQKAFEQE
EVLRDFLATDEDAKEIWDMALKLEGITRGTGKHAGGVVIAPTKLTDFSPIACDEDGNGLV
TQFDKDDVEQAGLVKFDFLGLRTLTIIKWALETINRTEVEEGREPLNIDFIPLDDKPTYA
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYDGLQPVLAPTYGIILYQEQVMQIAQVMGGYTLGQADMLRRAMGKKKPE
EMAKQRGGFIEGCANNGIDGELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVILIEECRHMKLRIDTPDVNISEFKFTVNEGGRIVYGLGAI
KGVGEGPVEAIVEARAEGPFKDLFDFCARVDLKRINKRTLEALIRSGALDRLGPHYHDEI
KAYQATIDQNRAVLLAAMEEAIASAEQTARSHNSGHVDLFGGVFAEPEADVYANHRRARE
LNLKERLRGEKETLGLYLTGHPIEEYEGEVRRLARQRIVDLKPSRETQTVAGLIVNLRVM
KNKRGDKMGFVTLDDRSGRIEASLFAEAFNAAQALLQTDALVIVEGEVSQDDFSGGLRLR
AKRVLGLEEARTALAESLRIAVRSESLAGDRLRWLGELCGRHRGACPVTIDYQGPTARAL
LQFGENYRIDPADGLIQTLRDQFGRENVFLNYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcatccttcgtccacctgcgtctacacacggaatactccctggtcgacgggatc
gtgcgagtgaaggggttggtcaaggccgctgaagcagccgggatgccggcggtggcggtg
accgaccagggtaacctctgttcgctggtcaagttctacaaggccgccatgggcgccggg
atcaagcctatcgctggcgccgacatctggatggccggtcgcgatggcaacgcccccctg
agccgcatgaccctgctggtcatgaacgccaagggctatcgcaacctcaccgagctcctg
tcccggggttttcaggaaggtcagcaggacgggcagatcgtcatccagcgcgactgggtc
aaggaagcctgcgaaggcctgatcgcactgtccggttcgaaggaaggcgaaatcggtctg
gcgctgctcgaaggcgatctggccctggccgatcagctcttcgaggaatggcagcaggtc
ttccaggatcgcttctatctggagatccagcgcaccgaaagagcaggtgacgaagagcat
ctgcatgcggcggtggccttggccgatcgttgtggtggtgccctggtggcgaccaacgac
gtgcgctttctcaaggccgaggacttcgaagcccacgagacccgcgtctgcatcggtgag
ggccgtccgctggacgatccccggcgcgagcgcaagtacagcgaccagcagtacctgaag
tcggcggccgagatggccgagctgttcagcgacctgcccgaggcgctggaaaacaccgtc
gagatcgccaagcgctgcaacatcgaaatccagttgggcaagtacttcctgcccaacttc
ccgattcccaacgggatgaccatcaacgactacctgcgccatgtgtccttcgagggcctg
gaggagcgcctggccgtgctctggccgcgcgagaccacgccgaactacgaggaaaagcgc
caggagtacgtcgaccggctcaacttcgagctcgacatcatcatccagatgggcttcccc
ggttacttcctcatcgtgatggacttcatcaagtgggcgaagaacaacggcgtaccggtc
ggtcccgggcggggctcgggtgccggctccctggtggcctatgtgctcaagatcaccgac
ctggatccgctggcctacgacctgctgttcgagcgcttcctgaaccccgagcggatctcc
atgcccgacttcgacgtcgacttctgcatggacggtcgtgaccgggtgatcgaatacgtg
gccgacctgtacggccgcgaggcggtgagccagatcatcacgttcggcaccatggcggcc
aaggcggtggtgcgcgacgtggcgcgggtacagggcaagtcctatggcctggccgatcgc
ctgtcgaagatgattcctttcgaagtgggcatgaccctgcagaaggccttcgagcaggaa
gaagtgctgcgcgacttcctggcgaccgacgaggacgccaaggaaatctgggacatggcc
ctgaagctggaaggcatcacccgcggcaccggcaagcacgccggcggcgtggtgatcgcg
ccgaccaagctgaccgacttctcgcccatcgcctgcgacgaggacggcaacggcctggtg
acccagttcgacaaggacgacgtcgagcaggccggcctggtcaagttcgacttcctcggc
ctgcgcaccctgaccatcatcaagtgggcgctggagaccatcaaccgcacggaagtggag
gaggggcgcgagccgctcaacatcgacttcatcccgctggacgacaagccgacctacgcc
ctgctgcagaaggccgagaccactgccgtcttccagctggaatcccgcggcatgaaggag
ctgatcaagaagctcaagccggactgcctggaagacctcatcgccctggtggcgctgttc
cgacccggtccgctgcagtcgggcatggtggacgacttcatcaaccgcaagcacggtcgc
gccgagctggcctatccgcacccggactaccagtacgatggcctgcagccggtgctggcg
ccgacctacggcatcatcctctaccaggagcaggtgatgcagatcgcccaggtcatgggc
ggctacaccctgggccaggcggacatgctgcgccgggccatgggcaagaagaagcccgag
gagatggccaagcagcgcggcggcttcatcgagggctgcgccaataacggcatcgatggt
gagctggcgggcaatatcttcgacctggtggagaaattcgccggttacggcttcaacaag
tcccactcggccgcctatggtctggtctcctaccagaccgcctggctgaagacccactat
ccggcacccttcatggccgcggtgctgtcggcggacatgcacaacaccgacaaggtggtg
atcctcatcgaggaatgccgccacatgaagctgcgcatcgacacgccggacgtgaacatc
tccgagttcaagttcaccgtgaacgaaggcgggcgaatcgtctacggcctgggcgccatc
aagggggtgggcgaggggccggtggaggccatcgtcgaggcacgtgccgaaggacccttc
aaggacctgttcgatttctgcgcgcgggtggacctcaagcgcatcaacaagcgcaccctg
gaagctctgatccgctctggcgccctggatcgcctggggccgcactaccatgacgagatc
aaggcctatcaggcgaccatcgaccagaaccgcgccgtgctgctggcggccatggaagag
gccatcgcctcggccgagcagaccgcccgcagtcacaacagcggccatgtcgacctcttc
ggtggcgtcttcgccgaacccgaggccgatgtctatgccaatcaccggcgcgcccgggag
ctcaatctcaaggagcgcctgcgcggagaaaaggaaaccctggggctgtacctgaccggc
caccccatcgaggaatacgaaggcgaggtgcgccggctggcgcgtcagcgcatcgtcgac
ctcaagccctcgcgcgagacccagaccgtggccgggctgatcgtcaacttgcgggtgatg
aagaacaagcgtggtgacaaaatgggcttcgtcaccctggacgaccgttccgggcgcatc
gaggcctcgctgttcgccgaggctttcaacgcggcccaggcgctcttgcagaccgacgcc
ctggtgatcgtcgagggcgaggtcagccaggacgacttctccggcggcctgcggctgcgc
gccaagcgggtgctgggcttggaagaggcccgtaccgccctggcggaaagtctgaggatc
gccgtgcgcagcgagtccctggccggtgaccggctacgctggctgggtgaactctgcggt
cgtcaccgtggtgcctgtccggtcaccatcgactaccagggccccaccgcgcgtgccttg
ctgcagttcggcgagaattaccggatcgacccggctgatggcctgattcaaaccctgcgt
gaccagttcggcagggagaacgtctttctcaactatcgttaa
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