Pseudomonas oryzihabitans: APT59_12705
Help
Entry
APT59_12705 CDS
T04267
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
por
Pseudomonas oryzihabitans
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
por03016
]
APT59_12705
Enzymes [BR:
por01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
APT59_12705
Transfer RNA biogenesis [BR:
por03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APT59_12705
Prokaryotic type
APT59_12705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALZ85006
UniProt:
A0A0U4P3M3
LinkDB
All DBs
Position
complement(2749269..2750120)
Genome browser
AA seq
283 aa
AA seq
DB search
MDFLDPTIIVPPQRIALGVEYKGARYRGWQRQQHGVRSVQETLEDALSEVAAAPIALHCA
GRTDCGVHATGQVVHFESPVARPLKAWVMGTNANLPSDISVTWVKPVSNEFHARFSAMAR
RYRYVIYNDPIRPAHLAEEVTWNHRPLRIEPMREAAQVLLGTHDFTSFRAKACQAKSAIK
TIHHLRLWQSGRLIVLDIRANAFLHHMVRNIAGVLMAVGCGERPVEWVAEVLAARERRLG
GVTAHPYGLYLVDAEYPESTPVPKRPLGPLFLGHIPELDDPQG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttggattttctagaccccaccatcatcgttcccccgcaacgcatcgcgcttggcgtcgag
tacaagggtgctcgctatcgcggctggcagcgccagcaacacggtgtgcgctccgttcag
gagacgctggaagacgccttgtccgaggtcgccgcggcacctatcgccctgcactgcgcg
gggcggaccgattgcggggtgcatgctaccggccaggtggtgcatttcgaatcccctgtc
gctcgaccgctcaaggcctgggtgatgggcaccaacgccaatctgccgtccgacatcagc
gtcacctgggtcaagccggtcagcaatgaattccatgcccgtttcagcgctatggcccgg
cgttaccgctatgtgatctacaacgatccgatccggcctgcccacctggccgaagaggtc
acctggaatcatcggccgttgcggatcgaaccgatgcgtgaagccgcccaggtgctgctc
ggtacgcacgatttcacctcctttcgcgccaaggcctgccaggccaagtcggcgatcaag
acgatccaccatctgcgtctctggcagagcggacggctgatcgtgctggatatccgcgcc
aacgccttcctgcatcatatggtgcgcaacatcgccggggtgctgatggcggtgggctgt
ggcgagcggccggtggaatgggtcgccgaggtcctggccgcgcgtgagcggcgcctgggc
ggtgttacggcccatccctacggcctctacctggtggacgccgaatatcccgaaagcacg
cccgtgccgaagcggccgctgggtccgttgttcctggggcatatccccgagctggatgac
ccccaaggctga
DBGET
integrated database retrieval system
