Porphyrobacter sp. LM 6: BG023_111812 Help Entry BG023_111812      CDS       T04468                                  Name (GenBank) exonuclease RecJ   KO K07462   single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Organism porl  Porphyrobacter sp. LM 6 Pathway porl03410   Base excision repair porl03430   Mismatch repair porl03440   Homologous recombination Brite KEGG Orthology (KO) [BR:porl00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     BG023_111812    03430 Mismatch repair     BG023_111812    03440 Homologous recombination     BG023_111812  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:porl03400]     BG023_111812 DNA repair and recombination proteins [BR:porl03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     RecJ      BG023_111812   DSBR (double strand breaks repair)    HR (homologous recombination)     RecFOR pathway proteins      BG023_111812    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BG023_111812 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DHH DHHA1 RecJ_OB Motif Other DBs NCBI-ProteinID:  AOL94731 UniProt:  A0A1D7NLS4 LinkDB All DBs Position complement(1871125..1872933) Genome browser AA seq 602 aa AA seqDB search MPSPAMTPLTFAPVLGVTTSLSGKAWRWRGGNMELGEEQAGDPRGLDRTILDQLLLTRGV AEDDLERHARPTLRAFLPDPSVFRDMDAAAERLADSVTNGERVTVYGDYDVDGATSAALL VELLRQLGNDAGYYIPDRLLEGYGPSGEALVKLAESGSQLIVTVDCGAMAHEALGMARDV GVDVIVVDHHKCSPELPPARALVNPNRLDESDLGAAHGHLAAVGVAFLLGIALVRTLRAR GWFAGRPEPDLMGLLDLVALGTVADVAALHGLNRAFVAQGLKILARRERIGMAALMDASR LNRAPQASDLGFALGPRINAGGRIGESTLGVRLLTTTDPEEARAIAAQLSQLNEERRAIE AAVQEAAEAQLAGQHNMAVQVLSGHGWHPGVIGIVAGRIKEKTGKPAVVIALDEAQGKGS GRSISGVDLGAAIIAAREAGLLVAGGGHAMAAGLTIEPARLADFAGFLDERLARDVDRAR AGAAMLLDLALAPGGLTPDLVETLEAAGPYGVGWPAPRVAVGPVRIIKADIVGKDHLRLI ASGNDGKSFKAIAFRAAESEMAQTLLHRSNGRRFHLAGRVKLDDWGSRPAAELQLEDAAF AD NT seq 1809 nt NT seq  +upstreamnt  +downstreamnt atgccctcccccgcaatgaccccgctgacatttgcgcccgtgcttggtgtcaccacctcg ctgtcgggcaaggcgtggcgctggcgtggcggcaatatggagctgggcgaggaacaggcg ggtgatccgcgcgggcttgaccgaacgatcctcgatcaactgctgctgacccgcggcgtg gccgaggacgatctcgaacgccacgcccgtcccaccctgcgcgccttcctgcccgatccg tcggtgttccgtgacatggatgccgccgccgaacgcctcgcggacagcgtaacgaacggc gagcgggtgacagtctacggcgactatgacgtcgacggcgcgaccagtgccgcgctgctg gtggagctgctgcgccagctcggcaatgatgcgggctattacatccccgaccgcctgctc gaaggctatggcccgagcggcgaggcgctggtgaagctggcggagagcggatcgcagctg atcgtcaccgtcgattgcggcgcgatggcgcacgaggcgctgggcatggcgcgcgacgtt ggcgtcgatgtgatcgtggtcgatcaccacaaatgctcgcccgaacttcccccggcccgc gcactggtcaatcccaaccgcctcgatgaaagcgatctgggtgccgcgcatggacacctt gcggcggtgggcgtcgccttcctactcggcatcgcgctggtgcggacattgcgggcaaga ggctggtttgcgggtcggcccgagcccgatctgatggggctgctcgatcttgtcgcgctc ggcaccgtggccgatgtcgccgcgctgcacggattgaaccgcgctttcgtggcgcagggg ctcaagatcctcgcccggcgtgagcgaatcggcatggccgcgctgatggatgcctcgcgg ctcaaccgcgccccgcaggcgagcgatctcggctttgcgctcgggccccgcatcaatgcg ggcgggcggatcggcgaatcgacgctcggcgtacgcctgctcaccaccaccgaccctgaa gaagcgcgcgcgattgccgcgcagctttcgcagctgaacgaggaacgccgcgccatcgaa gccgccgtgcaggaagccgccgaggcgcagcttgccgggcagcacaacatggccgtgcag gtgctttcgggccacggatggcacccaggcgtgatcgggatcgtcgcgggccggatcaag gagaagaccggcaagcccgcagtggtgatcgccctcgacgaagcgcagggcaagggctcc ggccgctcgatcagcggggtcgatctcggcgcggccatcatcgccgcgcgcgaagccgga ctgctggtggcaggcggcggacacgcgatggcggcgggtctgacgatcgaaccggcgcgg ctggccgacttcgccggcttccttgatgaacgcctcgcccgcgatgttgaccgcgcgcgc gccggggcggcgatgctgctcgatctcgcgctggcacctggcgggctgacccccgatctg gtcgaaacactggaggccgctgggccttacggggtcggctggcccgccccgcgcgtcgcc gtcggcccggtgcggatcatcaaggccgatatcgtcggcaaggatcacctgcggctgatc gccagcggcaatgacggaaagagcttcaaggcgatcgccttccgcgccgccgagagcgag atggcgcagaccctgctccatcgcagcaacggccgccgcttccacctcgccgggcgggtc aagctcgacgattggggcagccgtcctgccgccgaattgcagcttgaggatgccgctttc gccgattga

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