Porphyrobacter sp. YT40: E2E27_05650
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Entry
E2E27_05650 CDS
T06153
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00521
Streptomycin biosynthesis
pot00523
Polyketide sugar unit biosynthesis
pot00541
O-Antigen nucleotide sugar biosynthesis
pot01100
Metabolic pathways
pot01110
Biosynthesis of secondary metabolites
pot01250
Biosynthesis of nucleotide sugars
Module
pot_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
E2E27_05650 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E2E27_05650 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E2E27_05650 (rfbD)
Enzymes [BR:
pot01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
E2E27_05650 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QDH36078
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All DBs
Position
1193974..1194831
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AA seq
285 aa
AA seq
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MNVLVTGANGQLGGALQRTAPAWADINAIDVEDVDLTDAAMLTARLVVEAPDVIINAAAY
TAVDKAENDEALARAINAEAVAVMVEAMAGTGGKVVHVSTDYVFDGTASTPYPPDAPRNP
QSAYGRTKAEGEDHLRPEDLLVRTAWVYEAGGANFVRTMIRLMKERDELGVVADQIGSPT
WATGLARTLWALIEKGATGTFHHSDDGAVSWHGFAVAIAEEAHALGLIPRIPAINAITTA
DYPTPARRPAFSLLDCSATRAFLGDAAVPWRDNLRAMLKEEAKLG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcctcgtcaccggcgcgaacggccagcttggcggggccttgcagcgcaccgcg
cccgcatgggccgatatcaacgcgatcgatgtcgaggatgtcgacctcaccgatgccgcg
atgctcaccgcgcggctggtggtcgaagcgcccgatgtgatcatcaacgccgccgcctac
accgcggtcgacaaggccgagaacgatgaggctctggcgcgcgcgatcaatgccgaggct
gtcgcggtgatggtcgaggcgatggcagggaccgggggcaaggtggtccacgtctcgacc
gactacgtgttcgacggcacggcctcgacgccctatccgcccgacgcgccgcgcaatccg
cagtccgcctatggtcgcaccaaagccgaaggcgaggatcacctgcgccccgaagacctg
ctggtgcgcaccgcgtgggtctatgaagcgggcggcgcgaacttcgtgcggaccatgatc
cggctgatgaaggagcgtgacgagctgggcgtggtcgccgaccagatcggctctcccacc
tgggccaccggcctcgcccgcaccctctgggcgctgatcgaaaagggcgcgaccggcacc
tttcatcactccgatgatggcgcggtcagctggcacggcttcgcggttgccatcgccgag
gaggcccatgcgctgggcctcatcccccgcatcccggcgatcaacgcgatcaccaccgcc
gactatccgacccccgcccgccgcccggccttctcgctgcttgattgcagcgcgacccgc
gcctttctgggcgatgccgcggtcccctggcgcgacaatctgcgcgcaatgctgaaagag
gaagcgaagcttggctaa
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