Porphyrobacter sp. YT40: E2E27_14945
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Entry
E2E27_14945 CDS
T06153
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2E27_14945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pot03019
]
E2E27_14945
Enzymes [BR:
pot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
E2E27_14945
Messenger RNA biogenesis [BR:
pot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E2E27_14945
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Hpt
Motif
Other DBs
NCBI-ProteinID:
QDH35494
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Position
3169563..3170756
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AA seq
397 aa
AA seq
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MLRDLAAADWTRREGLAALTAALGAENIRWVGGAVRDGLLGAAVADVDCATTLLPQEVIA
ACGKAGIRTVPTGIEHGTVTALLKDGPVEVTTLRRDVATDGRRATIAFASDWAEDAARRD
FTINALYAHPQTLEIADYFGGLADLREGRVRFIGDARQRIAEDHLRILRYYRFQTRFGAA
LDTQAEDACAELAHTLKGLSRERIAAELLNLLALPDPHPTLTRMRARGVLGVILPETCPA
HLAALERLIAAEAVQGFAPDPVRRLAALLPPSPEVAETVAARLRLSKAQRGKLVNAAERR
ASDADNPKALAYRLTPPLAIDRLLLAGANARPLEGWEVPTFPLKGGAIVARGITAGPEVA
RLLQTIEARWVAEGFPSADRVNQMLAEELGTSAFDWG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgatctggcggcggcggactggacccgccgcgagggcctcgccgcgctgacg
gcggcgttgggggcggagaacatccgctgggtcggcggcgcggtgcgcgacgggctgctg
ggcgcggccgtagccgatgtggattgcgccaccacgctgctcccgcaagaggtgatcgcg
gcctgcggcaaggccggtatccgcacggttcccacgggcatcgagcacggcacagtcacc
gcgctgctcaaggacggccccgtggaagtcaccaccctgcgccgcgatgtggcgaccgat
ggccgccgcgccacgatcgccttcgcgtccgactgggccgaggatgcggcgcggcgcgat
ttcactatcaatgcgctctatgcccacccgcagacgctggagatcgcggactatttcggc
gggcttgccgaccttcgcgaaggccgggtgcgcttcatcggtgacgcgcgccagcggatt
gccgaggatcacctgcggatccttcgctattaccgcttccagacccgcttcggcgcggcg
ctcgatacgcaagcggaggacgcctgcgccgagctggcccacacgctcaagggcctcagc
cgcgaacggattgcggcggaattgctgaacctgctcgcgctgcccgatccccaccccacg
ctcacccggatgcgcgcgcgcggtgtgctcggcgtgatcctgcccgaaacctgccccgcc
cacctcgccgcgctcgaacggctgatcgccgccgaggccgtgcagggcttcgcgcccgat
ccggtgcgccggctcgccgcgctgctcccgccctcgcccgaggtggccgagacagtcgcc
gcgcggctgcggttgtcgaaagcccagcgcggcaagctggtgaacgccgccgagcgccgc
gccagcgatgccgacaatcccaaggcgctggcctaccgcctcaccccgccgctcgcgatc
gaccggctgttgctcgccggggccaacgcgcgcccgctggaggggtgggaggtgccgacc
ttcccgctgaaaggcggcgccatcgtcgcgcgcgggatcaccgccgggcctgaggtcgcg
cgcctgctccagaccatcgaggcgcgctgggtggccgagggcttcccctccgctgaccgc
gtgaaccagatgctcgccgaggagctgggcaccagcgcgttcgactggggctaa
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