Paralichthys olivaceus (Japanese flounder): 109631176
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Entry
109631176 CDS
T06037
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
pov04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109631176 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109631176 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109631176 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pov04147
]
109631176 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
pov00536
]
109631176 (col4a2)
Exosome [BR:
pov04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109631176 (col4a2)
Glycosaminoglycan binding proteins [BR:
pov00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109631176 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109631176
NCBI-ProteinID:
XP_019945335
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MQGQHTRGLNNLRLLLLCLVCAILVSGAHAGGKKHSGPCGGRDCSGDCKCFPEKGARGQP
GPLGPHGTQGPFGRPGDHGIQGPKGHKGDSGHSGILGPKGSVGQTGIPGFSGNDGIPGHP
GQAGPRGRPGADGCNGTKGDSGLSGQPGYNGSPGFPGQSGRKGEKGDSLELSVYMERFRG
NPGTPGIHGIFGPPGKPGWQGNRGFPGPKGPPGPPGPRGPKGTMTKVIKGTRGDQGDIGP
PGLQGNSTHPYSEPPYGPHYGIPGHRGEKGVKGERGDESYRGETGVMGFPGSRGEPGADG
RPGPRGDSGEAGPRGRDGFKGVRGEPGELISSGSWPWSTAAGPPGPLGEQGPDGERGPVG
DQGFPGPPGRPASDTQQQVWDFFGPFGIKGEQGEKGPPGEPGSPAVSVGPPGVDGRQGIR
GPPGAIGTWSEFFKGAPGGRGRPGNAGYKGVKGDHGECECSVVNSPSGLPGPAGDRGDPG
MMGEFGQEGDSGDPGPRGDDGFPGSHGLNGEPGPKGQKGEATVATQKGYPGDQGDPGRDG
ESGAQGVPGLNGLPGIPGSQGPPGEGPWGERGDKGFPGRPGQPGVAGLRGEPGAVLGAPK
GHRGLPGDDGLAGYDGVPGIAGSPGGCSSTGDGGRTVTGPCNADPGPPGQPGPPGPTGLP
GFPGLQGQKGTQGLLGVQGEKGETGEQGIGGRSGPPGFAGARGDLGFPGSKGSLGAPGLP
GVPGRHGAQGEKGFHGEIFGASPGPPGDSGMPGLQGNRGQTGNQGEPGYPGMGGMPGMIG
FKGENGPRGLQGEEGRPGPAGKYGYPGDPGQAGPPGSRGATGQPGFTGERGAEGESGPPG
PIGLKGIPGGYGDDGVLGEFGPPGNPGEPGADGRPGVPGMKGYKGSPGMSGFEGKRGDLG
VKGFGGLQGEPGVPGQVGLKGVIGQSGLKGERGVSGQQGSKPQIPAQMIVDMKGVKGDRG
HLGNQGFIGPRGSKGFPGFPGKEGTHGLPGDPSNEKGYYGDPGAQGLPGIKGMPGPTGNR
GISGFQGMPGNRGIKGSPGAYGASGDKGRKGVIGEKGPRIDLPGPTGLRGEDGFQGVLGQ
KGLIGYTGDRGAAGFDGIEGKRGGPGDPGISGHSGSDGQRGTPGNQGQKGFPGIPGKDGH
PGFPGFPGNRGFPGLKGLYGLHGLKGQKGIPGTPGLDIVGPAGEPGVKGAKGETGDTNSQ
PGVPGTAGLKGFEGPPGDQGHPGPPGFRGPIGPDGTPDRPGTSGDPGFIGREGLPGFPGP
RGFPGLDAPPGEKGISGYNGFPGVPGIKGFKGDQGSFGYRGPNGVSGKKGVKGEQGLMGV
PGMTGVKGERGPAGPKGNTGESGYRGFPGSQGPAPVPVRVPGERGLAGPQGILGPMGVRG
EIGPQGPPGDPGFVGPIGQKGMPGISGTPGTSGFRGEVGQMGHPGLQGMEGHRGSPGNPG
LPGMAGRSVSVGYLLVKHSQSDQTPMCPVGMSKLWNGYSLLYLEGQEKAHNQDLGLAGSC
LPRFSTMPFLYCNPGDLCYYASRNDKSYWLSTTAPLPMMPVEEGDIKPYISRCSVCEAPS
VAIAVHSQDITIPQCPAGWRSLWIGYSYLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIE
CNGAKGTCHYFANKQSFWLTSIDQSFHANPESETLKAGQLLARISRCQVCMKNL
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgcagggccaacacaccagaggactgaataacctgaggctgctgcttctgtgcctcgtc
tgtgccatccttgtctccggggcgcacgcgggtgggaagaagcacagcggcccctgcgga
ggaagagactgcagcggagactgcaaatgtttcccagagaagggggccaggggtcaacct
gggcctcttggtccccatggtacacaggggccttttggaagaccaggtgatcacggcatc
cagggaccaaagggccacaaaggcgacagtggccatagtggcatcctaggtcctaaagga
agcgtgggacaaaccggcattcctggtttttctggaaatgatggcatacctggtcaccca
ggacaagctgggcccagagggaggccgggtgccgacggttgtaacgggacgaagggagac
tcaggtttatctggacaacctggttataacggctcacctggttttcctggacaatcaggc
aggaagggagagaagggagactctctggagctgagtgtgtacatggagcgtttcagggga
aatccaggcacaccagggatccacggaatatttgggcctccaggaaagccaggatggcag
ggtaacagaggcttcccaggaccaaagggtcccccagggcctcccgggcctcgtggacca
aagggcactatgaccaaagtgattaaaggaaccagaggagaccaaggggacattggacct
ccagggctgcaaggaaactctacccatccttattctgagcccccctacggaccccactat
ggaatcccggggcatcgtggagaaaaaggtgttaaaggagaaagaggagatgagtcatac
agaggagaaactggtgtaatgggattccctggatcacggggtgaaccaggcgcagatggg
agacctgggccaaggggggattctggtgaagcaggaccaagaggcagagatggatttaag
ggagtcagaggtgaaccaggagagctgatctcatctggatcctggccttggtctacggca
gctggaccgccaggtccccttggtgagcagggtccagatggagagaggggtccagtagga
gatcaaggcttccccggacccccaggacgtcctgcctctgacacgcaacaacaagtgtgg
gacttttttgggccatttggcataaagggggaacaaggagagaagggcccaccaggggaa
ccagggagccctgcagtcagtgtaggacccccaggggtcgacgggcgccaagggatcagg
ggtcctcctggagcaataggaacatggtctgagttctttaagggggctccaggtgggaga
ggacggcctggcaatgcaggctataaaggagtgaaaggtgaccatggagaatgtgagtgc
agtgttgtaaactctccatcggggcttcctggccctgctggggatcgtggtgatcctggg
atgatgggagagtttggtcaggagggtgattcaggagacccaggtccccgaggcgatgat
gggttccctggctcacatgggctcaatggggaaccggggccaaaaggccaaaaaggggaa
gcaactgtggcaacacagaaaggatatcctggagatcagggggatcctggaagagacggt
gagtcaggagcacaaggtgttccaggcctaaacggtttaccaggaatccctgggagccaa
ggtcctccgggagaagggccctggggagaacgtggagacaaaggtttcccaggtcgacct
ggtcaacccggtgtagctggactgagaggagagccaggtgcagtccttggggcccccaaa
ggccatcgtggtttacctggggacgacggtctggcaggttatgatggagttcctggaata
gctggtagtccaggcggctgtagttcgacaggagatggaggacggactgtaacaggtcct
tgtaatgcagatccaggacctcctgggcagcctggccctccaggacccactggattacca
ggtttcccaggtctacaaggccaaaaaggaacacagggtctacttggtgttcaaggagag
aaaggagaaacaggagagcaaggcataggtggccgttctggaccaccaggttttgccggc
gcacgtggtgacctgggatttcctggtagcaaaggttcacttggtgcccctggtttgccc
ggtgtgcccggccgacacggggcacaaggtgaaaagggtttccatggtgagatctttggg
gcttcacctggacctcccggtgactctgggatgcctgggcttcaaggaaatagaggccag
actgggaatcaaggagaacccggctatccaggaatgggtggcatgccaggaatgattggc
ttcaaaggagagaatggacctagaggattgcagggggaggaagggaggcctgggcctgct
ggcaagtatggctaccctggagaccctgggcaagcaggtccacctgggtctcgtggcgct
actggacagccaggtttcactggagagaggggagctgaaggagaatcaggccctccaggt
ccaattggattaaaaggaatccctggggggtacggtgatgacggtgtccttggagagttt
ggcccacctggtaatcccggagagccaggtgcagatggacgcccaggagtcccaggaatg
aagggatacaaaggatctcccggcatgtcaggcttcgaggggaaaaggggtgatctcggg
gtgaagggcttcggggggctgcaaggagaacctggagtgccgggccaagtcggcctaaaa
ggagtgataggtcaaagtggactgaagggtgaacgtggtgtgagtggtcaacaagggtca
aagcctcagatccctgcccagatgattgttgacatgaagggtgttaagggagaccgcgga
catctaggaaatcaaggtttcattgggccaagaggttctaagggtttccccggtttccct
ggcaaggagggaactcatggtttacctggagatcccagcaatgagaaaggatattacgga
gatccaggtgcacaggggctcccagggataaagggaatgccaggccccactgggaatcga
ggaatttctggttttcaaggaatgccgggaaacaggggaattaaaggaagtcctggagcc
tatggtgcatcaggagacaagggaaggaagggggtcataggtgaaaaaggtcctaggata
gaccttccaggacccactggactgagaggagaggatggcttccaaggagttctcggccaa
aaaggactgattggatacactggggacaggggtgctgctggttttgatggcattgaaggg
aaaagaggaggtccaggtgatccaggaatatcaggacacagcggctcagatgggcagagg
ggaactcctggtaaccagggtcaaaaaggctttcctggaattcctggaaaagatggacac
ccgggttttcctgggtttccaggcaacagaggtttccctggcctgaagggtctttatgga
ttacatggactgaaaggacagaagggtatcccaggaacaccgggtctggatatcgttgga
ccagctggggagcccggagtcaaaggagctaagggagagaccggtgacaccaacagccag
ccgggcgttcctggaactgcgggtttgaaaggcttcgaaggacctccaggtgaccagggt
catcctgggccaccaggattccggggccccattggaccagatgggaccccagacagacca
ggaaccagtggggaccctggttttataggacgtgaaggattaccaggtttccctggacca
agaggatttcccggcctggatgctccccctggagaaaagggcatatcaggatataatggg
tttcctggagtccctggtataaaaggatttaaaggagatcaaggatcatttggatacagg
gggcctaatggtgtttctgggaagaaaggtgtgaaaggggagcaagggctgatgggagtt
cctggtatgactggagtgaagggagaaagaggaccagctggtccaaaaggaaatactggg
gaatcaggttaccgtgggttcccaggaagccagggtcctgctccagttcccgtcagagtc
ccaggagagaggggccttgcgggaccacagggtatccttggaccgatgggggttagaggg
gaaatagggccacagggtcctcctggtgatccaggtttcgtgggacccattgggcagaag
ggcatgccggggatcagtggaacaccaggaacatctggattccgtggagaagtcggacaa
atgggccaccccggtctgcaaggcatggaaggtcaccgcggcagccctggaaaccctggg
ttacctggcatggccggccgcagtgtcagcgttggctacttactggtgaagcacagtcag
tcagatcagacgcccatgtgtcccgtgggtatgtccaaactgtggaacggctacagtctg
ctgtaccttgagggccaggaaaaagcccacaaccaggacctcggtttggccggctcttgc
ctcccacgcttcagcaccatgcccttcctctactgcaatcctggagacctatgttactac
gccagcagaaatgacaagtcctactggctgtcgacaacggctcctcttcccatgatgccc
gtggaagagggagacataaaaccatacatcagccgctgctcggtgtgtgaagctccgtcg
gttgccatcgcagtccacagtcaagacatcaccatcccacagtgccctgccggctggcgc
agcctgtggatcggctactcctacctcatgcacacagcagcaggaaacgagggtggaggt
cagtccctgtcgtcgcccggctcctgcctggaggacttccgcacgacaccgttcatcgag
tgtaatggagccaaagggacgtgccactatttcgctaacaagcagagcttctggctaacc
tccattgatcagtcattccacgctaacccagaatcagagacgctgaaagcaggccagctc
ctggcacgcatcagccgctgccaggtctgcatgaagaacttgtga
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integrated database retrieval system
