Paralichthys olivaceus (Japanese flounder): 109631717
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Entry
109631717 CDS
T06037
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109631717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109631717
03036 Chromosome and associated proteins [BR:
pov03036
]
109631717
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109631717
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109631717
PBAF complex
109631717
GBAF(ncBAF) complex
109631717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
109631717
NCBI-ProteinID:
XP_019946150
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MATMSGGTNLGVPGTSQTSSGATVHRKKDSNPSARFWESPDTLAQLEVVRLWVGKHYKKF
VLVDAPSCQALAAVTLQLLQFQEDAFGRQATSPALTKLHAHCFLDLRPGGGLCHILGTAY
KFKAEQGWRRFDLQNPSRTERNVEMFSSIKGTLIQNNCMSLPVVYLDPTVDQELASRLTI
IITKHQGTLTEDRTLASHHIYPLPASTEEDEWMRPVMQKDKHVLVHWGMHPDSYDSWLSS
SDVQGEVEEAPHPDRPWRVHAGWVLDSDIFNEWMNEEDYCVDERNVPIILRQRIHLHDDQ
DSKSTPSKKRRRSPSPPSSEGRKKGKKGRRRGQQEEEPEEDLTKDMEDPIPVPNMEEVIL
PKNVNLKKDSENTPVKGGTMADLDELEDDFPGRDEEEGRGEVPRLSEGEENITEQTHHII
IPSYTSWFNNNSIHLIEKRALPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLSSTS
CRRNLTGDVCAVMRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQ
HKPLQVTASQHMLYFPEKSREKPSDCQNFGLRSDIYTKKHPKTKGASAGREWTEQETLLL
LEALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQS
ENPVMSTVAFLASVVDPRVASSAAKAALEEFSRVQEDSVDKVSETSNQFEKTELMDAEKM
ESNSTCHQVVGRTDGNVETSGAMVEGDGVKRENAENILAEERDGRGDDEESVERRELDGD
EGRRVMELELVEGNVAMAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKL
RHFEELETIMDREKEALEQQRQQLLSERQTFHTEQLKQAEMKVRQQREQQREQPGQPGQP
GQPGQPGQPGFTVQHSGQTVPNRMMPSGGNTQPMAPRHPGAPNGMYPSSQPDGITPAQPG
PPASTHS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatgtccggaggaacaaacctcggcgttcccgggacgagccagaccagctcc
ggggccaccgtgcatcggaagaaagacagcaacccgtccgccaggttctgggagagcccg
gacactttagcccagctggaggtggtgcggctgtgggtcgggaagcactacaaaaagttt
gtgttggtggatgctccatcatgccaggccctggcagcagtcactttacagctgctccag
ttccaggaggatgcctttggccgacaagctaccagtcctgctctcaccaagctgcatgca
cactgcttcctggacctgcgaccagggggaggactctgccacatccttggaactgcctac
aaattcaaggcagagcaaggctggcgaaggttcgatttgcagaatccgtcaagaacagag
aggaatgttgaaatgtttagttcaattaaagggacgctcatccagaacaactgtatgtca
ctgcctgtggtatatctggaccccacagttgatcaggagttggcaagcagactgaccatt
atcatcacaaagcaccagggtacactcactgaggaccgaacgctcgccagtcaccacatc
taccccttacctgcctccacagaggaagatgaatggatgcgtcctgtcatgcagaaagac
aagcatgtcttggtacattggggcatgcatcctgacagttatgacagctggctgtcttca
agtgatgttcaaggagaggttgaagaagcaccacatccagatagaccctggagggttcat
gctggttgggttcttgactcagacattttcaatgagtggatgaatgaagaagactactgt
gtggatgaaaggaatgtaccaataatccttcgccagcgtatacacctccatgatgaccag
gactcaaagtcgaccccatccaaaaagagaaggcgatccccctctcccccctcctctgaa
ggcaggaagaaaggaaagaaggggaggaggcgtggacaacaggaggaagagccagaagag
gacctgaccaaagacatggaggaccctatacctgttcctaacatggaggaggtcatacta
cccaagaatgtaaacctgaagaaagacagtgagaacactcctgtaaaaggaggcaccatg
gccgacttggatgagctggaggatgattttccaggaagggatgaagaagagggaagagga
gaagtgccacggttatcagagggagaagaaaatatcacagagcaaacccatcacattata
ataccaagctacacatcttggttcaataacaacagcattcacttaatagagaaacgggct
ctccctgaattctttaacggaaagaacaagtccaaatctccagaaatttacttggcgtac
cgcaacttcatgatcgacacgtaccggctcaacccccaggaatacctcagttcaacgtcc
tgtagacgcaacctcactggagacgtctgtgctgtcatgagggttcatgcatttttggag
cagtggggtttgattaactaccaagtggatgcagagagcagacccctccccatgggaccc
cctcccacgcctcatttcaatgtactggctgacacaccgtccgggctggcccccctacaa
cacaaacccctgcaggtgaccgcctcgcagcatatgttgtatttcccagaaaagagcaga
gagaagccgtcagactgtcagaactttggtctgcgcagcgacatctacaccaagaaacac
cctaagaccaaaggagcgagtgcaggaagggaatggacggagcaagaaacactcttgcta
ttagaggccttagaggtttacagagatgactggaacaaagtatccgaacatgtgggatcc
agaacacaggacgagtgtatactccactttctccgtctgccaatagaagacccttatcta
gaagactcctcagcctctctgggtccactagcgtaccaaccagtgcctttcagccaatca
gagaatcccgttatgagcactgtggccttcctggcatctgtggtggacccgcgggttgcg
tcatctgcagcaaaggcagcactggaggagttttcccgagtgcaggaggactcagtggat
aaggtctctgaaacatccaatcagtttgaaaaaacagaattaatggatgcagagaaaatg
gaatcaaactccacttgccaccaggttgttggaaggacagatgggaatgtggagaccagt
ggggcaatggtagagggagatggagtcaaaagggaaaatgcagaaaatatacttgcagag
gagagagatgggaggggagatgacgaagagagtgtagagcggcgagagctagatggggac
gaggggaggagagtaatggagctggagctggtggagggcaacgttgccatggcagcagcg
gctgctcttgcctcggcagccacaaaggcaaagcacttggcagcagtggaagagcggaag
atcaagtcccttgtggctcttctggtggagactcagatgaagaagctggagataaagctg
agacactttgaggagctggagaccatcatggaccgagagaaagaggctctggagcagcag
cggcagcagcttctctcagagagacagactttccacacggagcagcttaaacaggcggag
atgaaagtccgccagcagagggagcagcagagggagcagccggggcagccagggcagcca
gggcagccggggcagccagggcagccgggattcacagtgcagcattcaggtcagaccgtg
cccaacaggatgatgcccagtggaggcaatacccagccgatggcccccaggcaccctgga
gctcccaatggcatgtacccatcctcacagcctgatgggatcacaccagctcagcccggt
cctccagcctccacgcacagctga
DBGET
integrated database retrieval system
