Paralichthys olivaceus (Japanese flounder): 109643159
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Entry
109643159 CDS
T06037
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109643159 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pov04147
]
109643159 (copa)
Membrane trafficking [BR:
pov04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
109643159 (copa)
Exosome [BR:
pov04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109643159 (copa)
Exosomal proteins of bladder cancer cells
109643159 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
109643159
NCBI-ProteinID:
XP_019963744
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCNRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKWESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLLTGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIASKGKAGQMAADLDMDAS
GAEGWGDDAELQLDEDGFMDAQEGLGEDGIAKEEGGGWEVEEDLDLPPELDLQAGGGGGA
EDGFFVPPTKGTSPTQMWCNNSQLPVDHVLAGSFETAMRLLHDQVGVVNFGPYKSLFMQT
LTRGRNCYLGLPSLPCLRSHPQRNWKDCGAKQGLPAVGLRLSDLISRLQQCYQLTTSGRF
EEAVERFRVILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLEQQK
RLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR
KILAACEKTLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPTYKGQICR
VTQVTEIGKDVIGLRVSPLQFR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagtttgaaacgaagtcggcccgagttaaaggtctgagcttccatcctaaa
agaccatgggtcctcgcaagtttgcacaacggagtcatccagctgtgggattatcggatg
tgcaccctgatcgacaagttcgatgagcatgatgggcccgtcagaggaattgatttccac
aaacagcagcctctgtttgtgtctggaggagacgattacaaaattaaggtttggaactac
aagctgagacgctgtctcttcaccctccttggacacctggactacatcagaaccaccttc
ttccaccatgagtacccctggattctaagtgcgtcggatgaccagactatacgcatctgg
aactggcagtccaggacctgtgtctgtgtgctgaccggccataatcactatgtgatgtgc
gcccagttccatccatccgaggacctggtggtgtcagccagtctggaccagaccgtgcga
gtgtgggatatctccggtctgaggaagaagaacctgtctcctggtgctgtggagacggat
gtgcgaggcatctctggtgttgacttgttcggtgcctcggatgccgttgtcaagcatgtc
cttgagggccacgacaggggagtcaactgggcagccttccaccccaccatgcctctcatt
gtgtctggagctgacgacaggcaggtcaagatctggagaatgaacgaatccaaggcatgg
gagctggatacatgccgcggtcactacaacaatgtgtcctgtgccgtcttccacccgcgt
caggagctcatcctgtccaactctgaggacaagagcatcagggtgtgggacatgtccaag
agaactggagtgcagaccttccgtcgggaccatgatcgcttctgggtgctgggtgctcac
ccaaacctcaatctgtttgccgctggtcatgacagcggaatgattgtgttcaagctggag
cgcgagcgtccagcatacgccgtgcacgggaacatgctgtactacgtcaaggatcgtttc
ctccgccagctggacttcaacagcagcaaagacactgctgtcatgcagctgcgcagtggg
tctaagttcccagtgttcagcatgtcttacaacccagctgagaacgccgtcctgctctgc
aatagggcgaccaatctggagaacagcacatacgacctgtactctattcccaaagaaagt
gattctcagaaccccgatgcaccggaggggaagaggtcgtctggtctgacagcagtctgg
gtggccaggaaccgatttgccgtcctggaccgaatgcactctcttctgattaagaacctg
aagaatgaaatcgtgaagaaagtccaggttccaagctgcgaggaaatcttctacgcagga
acgggctcgctgctgctgcgcgatgccgatggcgtcactctgttcgatgtgcagcagaaa
cgctctctggccaccgtcaagatcgccaaggtcaagtacgtggtgtggagtgccgacacc
agccacgtggctctgctcgccaaacatgccatcatgatctgcaaccgtaagtgggaaagt
ctctgcaacattcacgagaacatccgagtgaagagcggagcctgggacgagagcggagtc
ttcatctacaccacctccaaccacatcaaatatgccctcacctctggtgatcatggcatc
atcaggactctggacctgcccatctatgtgacccgtgtgagaggaaacagcgtttactgc
ctggacagggagtgtcgaccacgtgtcctcaccattgaccccacagagtaccgcttcaaa
ctggccctggtcaaccgcaaatatgatgaggtgctccacatggtgcgtaacgccaagctg
gtgggtcagtccatcattgcctacctgcagaagaagggctaccctgaggtggcactgcac
tttgtcaaagatgagaaaacacgttttagtttggctctggagtgtggcaacatcgaggtg
gcgttggaggccgccaaggccctggatgagcgcagctgttgggagcgtctgggcgaggca
gcgctgctgcagggtcaccaccaggtcgtggaaatgtgctaccagaggaccaagaacttt
gacaagctcaccttcctgtacctcctcactggcaacctggccaagctgcgcaagatgatg
aagatcgctgagatcagaaaggacatgagcggccactaccaggcggcgctttacctggga
gacgtcagtgagagggtccgcatcctgaagaactgtgggcagaagtctctggcttacctg
actgcagccacccatgggctggatgaagaagctgaatcactgaaggagacctttgaccca
gaaaaggagacggtgcctgaggttgatccaaatgcacagctgctgcagcctcctccaccc
atcaaccctctggacaccaactggcctctgctcactgtgtcaaagggcttctttgaggga
gccattgcatcgaaagggaaggcaggtcagatggctgccgatctggacatggatgcttca
ggagcagagggctggggagacgatgctgaacttcagctggatgaagatggcttcatggac
gcccaggaaggattaggggaggatggaattgcgaaagaggagggaggaggctgggaggtg
gaggaagacctggaccttcctccagagctggacttgcaagctggtggaggcggaggagct
gaagacggtttctttgtcccgccaaccaagggcacgagtccgacccagatgtggtgcaac
aactcccagctgccagtggaccacgtcctagctggctctttcgaaacagccatgagactg
ctccacgaccaggttggagttgtgaactttggcccgtacaagtcgctgttcatgcagacg
ctaaccaggggccgcaactgttacctggggctgccctctctgccctgcctgcgtagtcac
ccccagaggaactggaaggactgtggggcaaagcaaggtctgcctgctgtgggcctgcgc
ctctcggacctcatctcccgcctgcagcagtgctaccagttgaccacttctgggcggttt
gaggaagctgtggagcgctttagagtcatcctgttgtcggtccctctgctggtggtcgat
aacaagcaggagatcgcagaggctcaacagctgatcacgatttgcagagaatacatcgtg
ggtctgactatggagactgagaggaagaagctgccgaaagacacattggagcagcagaag
aggctgtgtgagatggctgcttatttcacccactgtaatctccagcccgtccacatggtg
ctggtgttgcgcacggccctgaacctcttcttcaaactgcgtaacttcaaaacagctgct
ggctttgcacgccgcctgctggagctggggccgaagcctgatgtagcgcagcagacccgc
aagattttggctgcatgcgagaagaccctgacagatgcacaccagttgaactacgacccc
cacaatccatttgacctgtgcgctgcatcgtttgtccccctgtaccgtggacgccctgtt
gagaagtgtcctctgtctggagcctgctactgtcccacgtacaaaggccagatctgcagg
gtcactcaggtgacggagatcggtaaggatgtgatcggtctgcgtgtgagtcctctccag
ttccgttaa
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