Paralichthys olivaceus (Japanese flounder): 109643922
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Entry
109643922 CDS
T06037
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109643922
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109643922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
109643922
NCBI-ProteinID:
XP_019964739
LinkDB
All DBs
Position
Unknown
AA seq
1599 aa
AA seq
DB search
MINMIFIFIILLPVTQLQDLQELQDLQCPGSSCSPQLGDLMVGRSAQLSASSTCGLDGAQ
NYCIIGYLEEEKKCFTCDSRRPYNHYSNPNSHRIENIITTFDPERKTKWWQSENGVHHVS
IQFNLETVFQFSHLVLTFKSFRPAAMLVERSKDFGQTWKVFRYFAEDCSLHFPSVSNEAA
DSVDDIICDSRYSGSEPSTNGEVVLKALDPIFEIQNPYASNIQDLITLTNIRVNFTRLFT
LGDTLLSRRRRNPLNKYYYALYNMVVRGSCFCNGHASRCTPADGQRGDVFTQTGMVHGRC
VCQHNTAGNNCERCQNFHHDSPWRPGGGDTDDICRRCNCHGHSDSCHFDAIHFEATGGIS
GGMCDNCRHDRMGPHCEQCRPFLYQDPQRAMDDPHACIPCDCDAAGAHGGGLCEAQTGQC
LCKENVEGRRCERCKHGFFGLRQDNPAGCQACRCHVLGSVGSCDQLTGNCECDSLASGPL
CDRCPEGFWGLGNSAIRCSPCDCDVGGAHSIMCSPEDGQCHCLQNMIGRRCSDPAPGFFL
PSLDYFLYEAELTAPLPGGSHSSTDAPIPVYLQLNPSVLPQCEKYYREQGFDFKFTNGRV
VLVRRIRRLAHRRREGQPTSIPLDASHALQIIPRLQTRDQPVTWTGLGLVRVLEGAGLRF
TVDNLHSSTDYHLVIHYETEALSDWLASVSIIMMSPGDSVCSNNPTGSKTLILPGNSRGR
GLDSSVCLNAGGRYFVDVVFNKQSGSDGSHILIDSIGLIPSIESVQNCSQSELQSLNCIG
LSVELHSQDSLPEICQGLIKSMSARIHHGAVPCRCNLLGSLGPACSKLGGFCECKPNVIG
RCCDTCAPMTFDLGLDGCKLCRCDARGSVSQLCDQVRGQCVCRSDVTGQRCNHCHTGFWG
FPLCRPCDCNSLSETCDEETGECFNCREHATGPHCDRCVEGYYGNPIFRQPCQPCLCPDV
KNSGKFFATSCLHDPQSLSLTCNCQEGHTGSRCNRCSPGFYGDLTLPGARCAECPCNNNI
DLDDRNACDSLTGECLGCRHNTVGPRCQSCKPGYYGNALVQDCKECSCDRRGTEVTHCPL
GSSCYCDPSTGQCPCRTGVLGVLCDQCEDGYWNLDGPSGCQPCSCDPVNSFSNICNKVMG
QCPCRPEFGGRQCDECGENHFGNPDLQCISCDCNLEGTKRPSCDPETGECICRRGVTGIF
CDECALGYSSAFPACKECHPCTTLWAESVTDVHRAAQKMRTFIPRHGKNLRPGESHPRQQ
MLQMHSTLDSLTNLTGLSLQKLETVEKLCMRIGKLKAAVDPNMILIDPSPLLNTEMENIR
QEFKRLLKSVKENVMELPHEEEEEGDVDELLGEIQKILKHFMLDEKRVISATKALDDSVD
IRQEVKHKLSICGSRGDMTPVEKKITELSVVNLNRQICGRPGLDNCSGCGGALCVLATGR
RKCGGSSCDGVITISHHASERAEKVKEQLISLPSRLEESKNKMNHMKQAAQDSKDQAKDL
HDRINARLDTFEREKNRTREVIQQTKDYLMDDMVPIEDIEKMAIAVLNIQLPRSPAQIRS
MIDEINHLLSNTAHVQDELKKLEEPVRRAKDLLQKAQEV
NT seq
4799 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacatgatcttcatcttcatcattcttcttccagtgactcagctccaggacctt
caggagctccaggacctccagtgtcctggcagctcatgtagtcctcagctgggtgacctg
atggtaggtcgatctgctcagctctcagcctcatcaacctgtggtctggatggagctcaa
aactactgcatcatcggatacctggaggaggagaagaaatgtttcacatgtgactcacgt
cggccatacaatcactatagcaacccgaacagccaccgcatcgagaacatcatcacaacc
tttgaccctgagagaaaaactaaatggtggcagtctgagaacggtgttcatcatgtcagt
atccagttcaatctggagaccgtgttccagttcagtcacctggttctcacctttaagagc
ttccgtccagcagccatgttggttgagcgatcaaaggactttggacaaacgtggaaagtt
tttcgttattttgcagaagactgttcgcttcatttcccttcggtgtccaatgaggcagct
gacagtgttgatgacatcatctgtgacagtagatactccggatcagaaccgtccaccaat
ggagaggtagtgctgaaagcgctggatccaatatttgaaatacaaaacccgtacgcatca
aatatccaagacctgatcactttgactaatatccgggtcaacttcactcgtctcttcacg
ctcggtgacaccctgctgagtcgaagacgcaggaaccctctgaataaatattactatgct
ctttacaacatggtagtccgaggaagctgcttctgtaatggacacgccagcaggtgcaca
cctgcggacggacaacgtggggatgtcttcacccaaactggcatggttcatggtcgttgt
gtttgtcaacacaacacagctggaaacaactgtgagagatgtcagaactttcaccacgac
tccccctggaggccaggaggaggagacacagatgacatctgcaggagatgtaactgtcat
ggtcactcagactcttgtcacttcgatgccattcattttgaagcaacgggtggtattagc
ggtggcatgtgtgacaactgccgccatgacaggatgggtcctcactgtgaacagtgtcga
ccttttctatatcaggatcctcagagagcgatggacgaccctcatgcctgcataccttgt
gactgtgatgcagctggagctcatggcggcggtctctgtgaagctcagactggtcagtgt
ctctgtaaagaaaacgtggaaggccgacgctgcgagcgctgcaaacatggcttcttcggc
ctgaggcaggacaacccggccggttgtcaggcgtgcaggtgtcatgttttgggaagtgtt
gggtcatgtgatcagctgacaggaaattgtgaatgtgacagtttggcgagcggcccgctg
tgtgatcgatgtccagaaggtttctggggtttaggaaactcagcgattagatgttcgcca
tgtgactgtgacgtcggaggagctcacagcatcatgtgttctccagaggatggacagtgt
cactgtttacaaaacatgataggtcgacgctgctctgaccccgcccctggtttcttccta
ccttcacttgattacttcctgtacgaggcagagctgacagctccacttcctggaggaagt
cattcttctactgatgctcctattcctgtgtatttgcagttgaatccaagtgtgttacct
cagtgtgagaaatactacagagagcagggttttgactttaaattcaccaacggacgagtg
gttttggttcggaggattcggcgactcgcccaccggaggagggaggggcagccaaccagc
atccctctggacgcaagtcatgccctgcagattatcccccgtctgcagacacgtgatcag
ccagtcacctggaccggcctgggattggtcagagtgttagagggggctgggcttcgattc
actgtagataacctacattcatcaacggattaccatttagtgattcactatgagacagag
gctctgtctgattggctggcttcagttagcatcatcatgatgtcaccaggtgacagtgtc
tgcagcaacaacccaacaggaagtaaaactctgattcttcctggaaactccagaggacgt
ggtctggattcttcagtgtgtctgaatgcaggaggtcgatactttgttgacgtcgtcttt
aacaaacagtctggatctgatggatctcacatcctcattgactcgataggtctgattccg
agcatagagtctgtccagaactgctctcaaagtgaacttcaatctttgaactgcatcgga
ttgtctgttgagctccactcacaggattcactcccagaaatctgtcagggactgatcaag
agcatgtcagcacgaatccaccacggagctgttccttgcaggtgtaacctccttggctct
ctaggaccagcttgcagtaaactgggtgggttctgtgaatgtaaacccaatgtgattggc
cgttgctgtgatacctgtgcaccaatgacatttgacttgggactcgacggctgcaaattg
tgcaggtgtgacgctcgtggttcagtgtcgcagctgtgcgatcaggtcagaggtcagtgt
gtgtgtcggtcagacgtgacggggcaacgttgcaatcattgtcacacaggattctggggt
ttccccttgtgtcgaccctgtgactgtaacagtctatctgagacatgtgatgaagagacc
ggggagtgtttcaactgcagagaacacgccaccggaccacactgtgacaggtgtgtggag
ggttactatggaaaccccatcttcagacagccctgtcagccctgcttgtgcccagacgtg
aagaacagtggaaaattctttgccacttcctgcctacatgacccacaatcccttagtctg
acctgcaactgccaggaggggcacacaggttcacgatgcaacagatgcagccctggtttc
tatggtgacctgacgttgccaggtgcccgttgtgcagagtgtccctgcaacaacaacatc
gacctggacgaccgtaacgcctgtgacagcctgacaggtgaatgtctgggctgccgccac
aacacggtgggaccacgatgccaaagctgcaaacctggttactatggcaacgctctggtc
caagactgcaaagaatgctcctgtgaccggcgtgggacggaggtgactcattgccctctg
gggagttcttgttactgtgatccaagtacaggacaatgtccgtgcaggacgggtgtcttg
ggagtcctctgtgaccaatgtgaggacggatactggaacctggacggaccgtcaggatgc
cagccctgcagctgtgatcctgtcaactccttctccaacatctgcaacaaggtgatggga
cagtgtccatgtcgtcctgagtttggagggagacaatgtgacgaatgtggagaaaatcat
tttgggaatccagacctgcagtgtatctcttgtgactgtaacctggagggaaccaagcgc
ccatcatgtgaccctgaaaccggagagtgtatctgtcgaagaggagtcaccggtatcttc
tgtgatgagtgtgccctcggctacagctcggcattcccagcgtgcaaggagtgccacccg
tgcaccactctctgggctgaaagtgtcacagatgtccatcgagcagcacagaaaatgaga
accttcatccctcgccacggcaaaaacctgcggcctggagagagtcacccccggcaacag
atgctgcagatgcactccacgctggacagcctcaccaatctgacaggactgtcactgcag
aagttagagacggtggaaaaactttgtatgaggattgggaagttgaaagctgccgttgat
ccaaacatgatccttatcgatccatctcctcttctcaacactgaaatggaaaacattcgt
caggagtttaagaggctgctgaaaagtgtgaaggagaatgtgatggagcttccacatgaa
gaagaggaagaaggagatgtggacgagctgctgggcgagatccagaagattctgaaacat
ttcatgttggatgaaaaaagagtaataagtgcaactaaagctttagacgactccgtggac
atcagacaggaagtgaaacacaaactgagcatttgcggcagcagaggagacatgacgcca
gtggagaagaagatcacagagctcagcgtggtcaacctaaaccgacagatctgtggacga
ccaggtctggacaactgttctggatgtggtggagctctgtgtgttctggctacaggacga
aggaaatgtggaggttcaagctgtgacggagtcataaccatcagtcaccacgcttcagaa
cgagcagagaaagtgaaggaacaactcatctcactcccatcgagacttgaggagtccaag
aacaagatgaaccatatgaaacaggcagctcaggactccaaagaccaggctaaagatctg
cacgatcggatcaacgcgcgactagacacctttgaaagagagaagaacagaaccagggag
gtgatccagcaaaccaaagactacctgatggatgacatggttcctattgaagacatcgag
aaaatggccatagctgttctgaacatccagctgccacgatcacctgctcagatccgatca
atgattgatgaaatcaatcatctactctcaaacaccgcacatgtccaggatgagctgaag
aagctggaggagcctgtgaggcgagccaaggacctgctgcagaaagctcaggaagtcaa
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integrated database retrieval system
