Pandoraea oxalativorans: MB84_13235
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Entry
MB84_13235 CDS
T03840
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pox
Pandoraea oxalativorans
Pathway
pox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MB84_13235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pox03400
]
MB84_13235
DNA repair and recombination proteins [BR:
pox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MB84_13235
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MB84_13235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
FlaG
Kinesin
AAA_11
DUF2851
UB2H
AAA_16
AAA_22
DUF6827
Motif
Other DBs
NCBI-ProteinID:
AKC70237
UniProt:
A0A0E3YE27
LinkDB
All DBs
Position
1902082..1904169
Genome browser
AA seq
695 aa
AA seq
DB search
MTPAADTDLDESKFLTFPDSPYQLYCPFPAAGDQPTAITQLTEGIDDGLAFQTLLGVTGS
GKTFTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFLPRNAVEYFVSYYDYYQPEAYVP
QRDLFIEKDSSVNEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPSEYHQMILTVRQ
GDKLGQREIIARLIAMQYTRNETDFGRGTFRVRGDTIDIFPAEHAELALRVELFDDEVDS
LQLFDPLTGRVRQKVPRFTVYPSSHYVTPRETVLRAIETIKDELRERLDFFYKEGKLVEA
QRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLVDYLPPDALMFLDESHVL
IGQFNGMYNGDRARKENLVNYGFRLPSALDNRPLKFAEYERKMRQAIFVSATPADYEAKR
TGQIVEQVVRPTGLIDPTIEVRPARTQVDDVLSEINKRVAVGERVLVTTLTKRMAEQLTE
YLSDNGVKVRYLHSDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDAD
KEGFLRAERSLIQTIGRAARNVNGTAILYADKMTESMKRAISETERRRAKQMAHNEAHGI
VPQGVKKRIKDIIDGVYDPEDAKAEMAEAKEQAHYQDMSEKQLAREIKKLEKQMQEHARN
LEFEKAAKVRDQLLHVKALVFGTDGASEAELGPKA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgcggctgacaccgatctcgacgaaagcaagttcctgacgttccccgactcg
ccttatcagctctattgcccgtttcctgcggcaggcgatcagcccacggccatcacccag
ttgaccgaggggatcgatgacgggctcgcgtttcagaccctgctgggcgtgaccggttcg
ggcaagacgttcacgatggcgaatgtgattgcccgtatgggacgtccggccatcgtgttt
gcaccgaacaaaaccctggcggcacagttgtattccgagtttcgcgaattcctcccgcga
aatgcggtggagtacttcgtctcatactacgactattaccagccggaagcgtacgtgccg
cagcgcgatctgttcattgagaaggactcgtcggtcaacgagcacattgagcagatgcgg
ttgtcggcgacgaagagcctgctggaacgccgcgatgtcgtaatcgtcgcgacggtgtcc
gccatctacggtatcgggaatccgagcgagtaccaccagatgatcctgaccgtgcgtcag
ggcgacaagctggggcagcgcgagatcatcgcaagactgatcgcgatgcagtacacgcgt
aacgagacggatttcgggcgcggcacgttccgtgtgcgtggtgacaccatcgatatcttc
ccggcggaacacgccgagctggcgctgcgcgtggagttgttcgacgacgaggtcgactcg
ttgcaactcttcgatccgctcacggggcgtgtgcgccagaaggtgccgcgattcacggtg
tatccgtcctcacattacgtgactccgcgagagacggtgctgcgagcgatcgaaacgatc
aaggacgaacttcgcgagcggctcgacttcttctataaggaaggcaagctggtcgaagcg
caacgtctcgaacagcggactcgcttcgatctggagatgttgcaggagctggggttctgc
aagggcattgaaaactactcccgacatctgtcgggggcagcgcccggcgagccgccgccg
acactcgtcgactatttgccgccggacgccttgatgttcctcgacgagtcccacgtgctc
atcggccagttcaacggcatgtacaacggcgaccgtgcgcgcaaggaaaatctggtcaat
tacggcttccgtctgccgtcggcgctggataaccgtccgctgaagtttgccgagtacgag
cgcaagatgcgtcaggcgatcttcgtctctgcgacgcccgcagattacgaggccaagcgt
accgggcagattgtggagcaggtggtgcgtccgaccgggctgatcgatccgacgatcgaa
gtgcgtccggcccgtacgcaggtggacgacgtgctctcggaaatcaacaaacgcgtggcg
gtaggtgagcgcgtcctcgtgacgacgctcacgaagcgaatggcagagcaattgaccgag
tacctatcggataacggcgtgaaggtccgttatctgcacagcgatatcgacaccgttgaa
cgcgtagaaatcatccgtgacctgcgtttgggcgcattcgacgtactcgtcggtatcaac
ttgctgcgtgaggggctggatattccggaggtgtcgctggtcgcgattctggatgcggac
aaggaaggcttccttcgcgccgagcgttcactgattcaaacgatcgggcgggccgcacgt
aacgtgaacggtaccgccatcttgtacgcagacaagatgaccgaatcgatgaagcgggcg
attagcgagacggagcgtcgtcgcgccaagcagatggcgcacaacgaagcgcacgggatc
gtgccgcaaggcgtgaagaagcgcatcaaggacatcatcgacggtgtctacgatccggaa
gacgccaaggcggaaatggcggaggcgaaagagcaagcgcactatcaggacatgtccgag
aagcaactggcgcgcgagatcaagaagctcgaaaagcagatgcaagaacatgcgcgtaat
ctcgagttcgagaaggcggccaaggtgcgagaccagttgctgcacgtcaaggcgctggtg
ttcggtaccgatggcgccagcgaggcggaattgggcccgaaggcctga
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