Komagataella phaffii: PAS_chr3_0595
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Entry
PAS_chr3_0595 CDS
T01092
Name
(RefSeq) Translation initiation factor eIF4A, identical to Tif1p
KO
K03257
translation initiation factor 4A
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr3_0595
03012 Translation factors [BR:
ppa03012
]
PAS_chr3_0595
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_chr3_0595
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PAS_chr3_0595
mRNA cycle factors
Stress granule specific factors
PAS_chr3_0595
Translation factors [BR:
ppa03012
]
Eukaryotic type
Initiation factors
eIF-4
PAS_chr3_0595
Exosome [BR:
ppa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PAS_chr3_0595
Exosomal proteins of bladder cancer cells
PAS_chr3_0595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
UTP25
fragilysinNterm
AAA_22
UvrD-helicase
PhoH
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
8199798
NCBI-ProteinID:
XP_002492821
UniProt:
C4R506
LinkDB
All DBs
Position
3:complement(1126907..1128118)
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AA seq
403 aa
AA seq
DB search
MSEGIIEIDTNLIETNYDQVVSTFDELNLKEQILRAVFAYGYEFPSAIQSRAILPIVAGR
DVLAQAQSGTGKTATFAISALQRLDEKLKAAQVLILAPTRELALQIKKVVLALGMHLNIS
VHACIGGVDPALDVKAFNSGVQIVVGTPGRVQDMIERGAFRTENVKMVILDEADEMLSTG
FKEQIYTLFTLLPSTTQVVLLSATMPQEVLEVTTKFMNNPIRILVKKDQLTLEGIKQFYV
DVGEEQYKFDCLCDLYDSISVTQAVIFCNTRRKVEELTERLTAQKFTVSAIHSELSQTER
DTIMQEFRTGSSRILISTDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGV
AINFVTSKDVEMMKEIEKFYSTQIDELPSSITDLFETEEVNES
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggtattattgaaatcgacactaacttaatcgagaccaactacgaccaggtt
gtcagcaccttcgatgagctgaacctgaaggagcaaatcctgagagccgtttttgcttac
ggttacgagttcccatctgccattcaatctcgtgccattttgccaattgttgctggtcgt
gatgtcttggcccaagcccagtccggtaccggtaagactgctacctttgccatctccgct
ttgcagagattggatgagaagctgaaggctgcccaagttttgatcttggccccaaccaga
gagttggccctgcagatcaagaaggttgttttggccctcggtatgcacttgaacatctct
gtccatgcctgtatcggtggtgttgacccagctttggatgtcaaggccttcaactccggt
gttcaaatcgtcgttggtaccccaggtagagtccaagacatgatcgaacgtggagctttc
agaactgagaacgtcaagatggtcattttggatgaggccgatgagatgttgtccactgga
ttcaaggagcaaatctacaccttgttcacattgttaccatccactacacaggttgttctt
ctatccgccaccatgcctcaagaggtgttggaggttaccaccaagttcatgaacaaccct
attcgtatcttggtcaagaaggaccaattgaccttggaaggtattaagcaattctacgtc
gacgtcggtgaagaacaatacaagttcgactgtctgtgtgatctgtacgactccatctcc
gtcacccaggccgttatcttctgtaacaccagacgaaaggtcgaggagttgactgagcgt
ttgaccgcccagaagttcaccgtctctgctatccactctgagctgtcacaaaccgagaga
gacaccatcatgcaagagttcagaaccggttcttccagaatcttaatctccaccgacttg
ctggccagaggtatcgatgtccaacaagtctcattggttatcaactacgacttaccatct
aacaaggaaaactacatccacagaatcggtagaggtggtcgtttcggtagaaagggtgtt
gctatcaacttcgtcaccagcaaggacgttgagatgatgaaggagatcgagaagttctac
tctacccaaatcgacgagttgccatcttccatcactgacttgtttgagactgaggaagtt
aatgagtcttag
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