Komagataella phaffii: PAS_chr4_0276
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Entry
PAS_chr4_0276 CDS
T01092
Name
(RefSeq) Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PAS_chr4_0276
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppa01007
]
PAS_chr4_0276
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr4_0276
Enzymes [BR:
ppa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
PAS_chr4_0276
Amino acid related enzymes [BR:
ppa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
PAS_chr4_0276
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PAS_chr4_0276
Prokaryotic type
PAS_chr4_0276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
YolD
Motif
Other DBs
NCBI-GeneID:
8200945
NCBI-ProteinID:
XP_002493689
UniProt:
C4R7D5
LinkDB
All DBs
Position
4:552563..554053
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AA seq
496 aa
AA seq
DB search
MSDLQHRILQVLDAQDVIQDTKVQFPELDSQTVQAALNSLLARSMIKYTNIETDYWLLTD
EAKDIVQNGSHEFRLLQEVTKNLEGLKIADVGTVLGKNGKLGQAKAFKNGWISKDGDRLL
TKFKDSPLPKDETAQNLRDIQENQGAGVDKKELQDLKKRKLITMSKIVSYKVEKAAEFSL
EIVQLNADITSDMIQSGSWKTAKFKPYNFNSEGVFPHSGALHPLNKVREEFRQIFFSMGF
TEMPSNQYVESGFWNFDTLFVPQQHPARDLQDTFYLKDPALAKRPEDKEYWENIQRVHQD
GAFGSIGYRYPWKEDESLKMVLRTHTTAISAAMLKKLAEDPKPTRLFSIDRVFRNEAVDA
THLAEFHQVEGVLADYNLTLGDLIGFMQSFFDKMGVHDLRFKPAYNPYTEPSLEIFAYHK
GLGKWVEIGNSGMFRPEMLEPMGLPKNLRVLGWGLSLERPTMIKYKLSNIRDLLGHKVSL
DFIESNPAARLDEDLV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacctccaacatcgtattttacaggttttggatgcacaagatgttatccaggat
acaaaagtacagtttcccgaattagattcgcagacggttcaagccgctttgaactctctg
ctcgctagatctatgatcaagtacacaaacattgaaaccgattactggctacttacggat
gaggccaaggatatcgtccagaatggctcccacgagtttagattgttgcaggaagtcact
aagaacttagaaggtctgaagattgcggatgtcggaacagttctaggaaagaacggtaaa
ctaggccaggccaaggcctttaaaaatgggtggatttccaaagatggtgacagattattg
acaaaattcaaggacagcccattgccaaaggatgaaactgctcaaaatttaagagacatt
caagagaaccaaggtgcgggtgtagacaagaaggaactgcaagacctaaagaagagaaaa
ctgattaccatgagtaagattgtatcctacaaagttgaaaaggcagctgaatttagtcta
gaaatcgttcaattgaatgctgacatcaccagtgatatgattcagtctgggtcgtggaaa
actgccaaatttaagccttacaatttcaattctgaaggtgtctttccacatagtggagct
ctgcatcctttgaacaaagtcagggaagagttcagacagattttcttttctatgggtttt
actgaaatgccttctaatcagtatgtcgagtctggattctggaattttgacactctattc
gtgccacaacaacatcctgccagagacttacaagataccttctatttgaaagacccagct
ttagcaaagcgtccagaagacaaagagtactgggaaaacattcaaagagttcaccaagat
ggagcttttggctctatcggttacagatatccttggaaggaagatgaatcattaaaaatg
gtactgagaacacatactacagccatttccgctgccatgttgaaaaaactagccgaggat
ccaaaacctaccagactcttttccattgatagagttttcagaaacgaggctgtggatgct
actcatttggctgagttccaccaagtagagggtgttttagctgactacaacctgacgtta
ggagatctgatagggttcatgcagtcgttttttgacaagatgggagtccacgatcttcgt
ttcaagcctgcatacaacccatacacagagccatcattggagatttttgcatatcacaaa
ggattaggtaaatgggtcgaaattggaaattctggtatgtttagaccagagatgttggag
ccaatgggattgcctaagaacctaagagtactaggatggggattgtcactagagagaccc
actatgattaagtataagctgagcaatatcagagatttactgggtcataaggtgtctttg
gactttatcgagagtaaccctgctgctaggttggatgaggacttggtttag
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