KEGG   Komagataella phaffii: PAS_chr4_0733Help
Entry
PAS_chr4_0733     CDS       T01092                                 

Definition
(RefSeq) Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p)
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
ppa  Komagataella phaffii
Pathway
ppa00020  Citrate cycle (TCA cycle)
ppa00190  Oxidative phosphorylation
ppa01100  Metabolic pathways
ppa01110  Biosynthesis of secondary metabolites
ppa01130  Biosynthesis of antibiotics
ppa01200  Carbon metabolism
Module
ppa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppa_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    PAS_chr4_0733
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    PAS_chr4_0733
Enzymes [BR:ppa01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     PAS_chr4_0733
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C GIDA Thi4 Pyr_redox_2 FAD_binding_3 HI0933_like DAO NAD_binding_8
Motif
Other DBs
NCBI-GeneID: 8200628
NCBI-ProteinID: XP_002494175
UniProt: C4R8S1
LinkDB All DBs
Position
4:1400228..1402141
Genome map
AA seq 637 aa AA seqDB search
MLSVRRQLMSGRSWFSTTSVARKVYSAQQDVKGTNASIAMAKDYHIIDHEYDCVVVGAGG
AGLRAAFGLAKEGFKTACISKLFPTRSHTVAAQGGINAALGNMHKDDWHWHMYDTVKGSD
WLGDQDAIHYMTREAPDSIIELEHYGVPFSRTEEGRIYQRAFGGQSKEYGKGGQAYRTCA
VADRTGHALLHTLYGQSLRHNTHFFIEFFAMDLLMHDGKCVGCIAYNQEDGTIHRFKAHK
TIIATGGYGRAYFSCTSAHTCTGDGFGMVSRAGLPLEDLEFIQFHPSGIYGSGCLITEGA
RGEGGFLVNSEGERFMERYAPTAKDLACRDVVSRAITMEINEGRGVGPLKDHMYLQLSHL
PASVLHERLPGISETAHIFAGVDVTKEPIPILPTVHYNMGGVPTKWSGEALTLDEDGNDK
VVEGLLACGEAGCASVHGANRLGANSLLDLVVFGRAVAHTIRDCLTPNTPHKELPADIGF
ESIANLDRVRTADGDISTADLRLEMQRTMQKHISVFRTQDIMDEGVKQINEIDKKFANIK
TTDRSMIWNSDLVETLELQNLLTCATQTAKSASVRKESRGAHARDDFPERDDENWMKHSL
SWQHKSGSPVELNYRNVITETLDEAECKPVPPTVRAY
NT seq 1914 nt NT seq  +upstreamnt  +downstreamnt
atgctgtcagtccgtcgtcagcttatgagtggccgctcgtggttctcgaccaccagcgta
gctcgcaaagtatactcagctcaacaagatgtcaaaggtaccaatgcttctattgccatg
gcaaaagattatcatatcatcgaccacgaatatgactgtgtagttgttggtgctggtggt
gctggtctgagagcagcatttggtttggccaaggagggttttaaaacagcctgtatttcc
aagcttttccccaccagatctcatacagtcgctgcccaaggtggtatcaacgctgcttta
ggtaacatgcacaaagatgactggcattggcatatgtacgatacagtcaagggatccgac
tggttgggtgaccaagatgccatccattacatgacccgtgaggctccagattcgatcatt
gaattggaacactacggtgtccctttctctcgtactgaggagggaagaatctaccaacgt
gcttttggtggacaatccaaagagtacggtaagggtggtcaggcctacagaacttgcgct
gtcgcagacagaaccggtcacgctttgttgcacaccttgtatggtcagtctcttcgtcac
aacacccacttctttattgagttctttgccatggatctattgatgcatgacggtaagtgt
gtgggatgcattgcctacaaccaagaggatggtactattcaccgtttcaaagcacacaaa
accattatcgctactggaggttacggacgtgcctacttctcttgtacatctgctcacact
tgtactggtgatggtttcggaatggtttctcgtgcaggtctgccattggaagacttggaa
ttcattcaattccacccatctggtatctatggttctggatgtctgatcaccgaaggtgcc
cgtggtgagggtggtttcttggtcaattctgagggtgaacgtttcatggaacgttatgcc
cctactgctaaggatttggcttgtagagatgttgtttcgcgtgccattaccatggaaatt
aatgagggacgtggtgttggtccattgaaggaccacatgtatttacaattgtctcacttg
cctgcctctgtgttacacgaacgtttgccaggtatttctgaaactgctcacatttttgct
ggtgtcgatgtcactaaggagcctatcccaattctgcctacagttcattacaacatgggt
ggtgttccaactaaatggagtggtgaagctcttaccctggatgaagatggaaatgataaa
gttgttgaaggtctactcgcctgtggtgaggctggatgtgcctctgtgcatggtgccaac
agattgggtgccaactccttgctggatttggtcgtatttggccgtgctgttgcccatact
attagagactgtttgactccaaacactcctcacaaagagctgcctgcagacattggtttc
gaatcaattgctaatttggatcgtgtaagaactgctgatggtgatatctctactgctgat
ctgagattggagatgcaacgtactatgcagaagcatatctctgttttcagaactcaggat
ataatggacgaaggtgtcaagcaaatcaatgaaattgacaagaagtttgccaacatcaag
acaacggacagatctatgatttggaactctgacttagtcgagactttggagcttcagaat
cttttgacctgtgccacacagacagctaagtctgcttctgtccgtaaagaatctcgtggt
gctcatgccagagacgatttcccagagagagacgatgagaactggatgaaacactccctg
tcatggcagcacaagagcggttctcctgttgagcttaattacagaaacgttattactgag
actttggatgaggctgagtgtaagccagttcccccaactgtccgtgcctactaa

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