Palaeococcus pacificus: PAP_06530
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Entry
PAP_06530 CDS
T03210
Name
(GenBank) DEAD/DEAH box helicase
Organism
ppac
Palaeococcus pacificus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_helicase_helical
ERCC4
Helicase_C
DEAD
ResIII
HHH_2
HHH_5
HHH
UPF0758_N
SWI2_SNF2
HHH_3
Helicase_C_2
AAA_19
Taeniidae_ag
Motif
Other DBs
NCBI-ProteinID:
AIF69703
UniProt:
A0A075LYQ1
LinkDB
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Position
1172642..1174936
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AA seq
764 aa
AA seq
DB search
MYLRRDLITPRVYQEVIFARCKEKNCLVVLPTGLGKTFIAMLIADYRLSKYGGKILMLAP
TKPLALQHRESFARLFDIPEEKINTLTGELSPEKRAEVWKKSIIITATPQTIENDLVVGR
ISLEDVVLLVFDEAHRAVGSYAYVYIAKEYARQAKHPLILGLTASPGSNEEKIREIIRNL
HIEHVEIRTESSPDVKPYVQGVKLEWIKVELPELYKEVRKLLREMLKDSLKPLKEAGIID
SYSPDLPKKDVLNAGRIINAEVARGNYALGRLMLYQAKAMKLHHAIELLETQGLSALRSY
LGKLYNEGKRGKTKSAKELIQDPRMRKAISLLMQANELGLDHPKMDKLFELIKKQVEKKP
NSKIIVFTNYRETSKKLASEINKLGIKAVRFVGQASREKDKGMSQKKQKEVLELFSQGVF
NVLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHRPGRVVVLMARGTRDEA
YYWSSRRKEKAMFVTLKKVSEMVKREKQASLLGFMGTKAKEEAKHEKEPPKEEALPVKPI
FVKKPKGIVVYVDSRELKSQVPKYLKELGAEIQVKTLDVGDYVVSEDVAVERKSANDFIQ
SLIDGRLFEQMGRLKDAYLRPIVIVEGQLYGIRNVHPNAIRGALAAVALDWGVPILFSND
AKETAQFIYLIARREQEERKKEVSLRGEKKALTLAERQRLIVEGLPNVSATLAKRLLKHF
GSVERVFTATEEELMEVEGIGEKKAREIRKVITVPYVDEENEES
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaaggagagatttaatcacaccacgcgtttatcaagaggtcatatttgcgaga
tgcaaagagaagaactgtttagttgttctgccgacaggtttgggaaagacattcatagcc
atgcttatagccgactatcgcctctctaagtatggcgggaagatactaatgcttgctcct
acgaaacccctagctcttcagcatagagagagctttgctaggctttttgacattcctgag
gaaaagataaatacgctcacgggggagctctccccggaaaaaagggcggaagtttggaaa
aagagtattattattacagcaacgccccaaacgatagagaacgatttagttgtggggaga
attagcttggaagatgttgttcttctcgtctttgatgaagcccatagggctgtgggaagc
tatgcttatgtttacatagcaaaagagtatgcgagacaggcaaagcatcctctaattttg
ggtctaacggcatctccaggaagcaatgaggagaaaattagagagattatacggaatctc
cacatagagcatgtagagattagaaccgaaagttcgcccgatgttaagccctatgtccag
ggagtaaagctcgaatggattaaggtagagctccccgagctttacaaagaggttaggaag
ctgttgagagagatgcttaaagattcgcttaagcccctaaaggaagcggggataattgat
agctattcccctgatttgccgaagaaggacgttctaaacgctggaaggataataaacgct
gaagtggcaaggggaaactatgcccttggacgtctcatgctgtatcaagctaaggctatg
aagctccaccacgcaatagagctccttgaaacgcagggcttatctgcattgaggagctac
ttaggaaagctctataatgaaggcaagagaggaaagacaaaatcagctaaagaattgata
caggatccaaggatgagaaaggccatttcccttttaatgcaggcgaatgagcttggctta
gaccacccaaagatggacaagctttttgagctcattaagaagcaggtggagaaaaagccc
aactcaaagataattgtcttcacaaactatcgtgagacttcaaagaagcttgcaagcgag
ataaacaagctcggcattaaagcggttcgctttgttggacaggcaagcagggaaaaggat
aaaggaatgagtcaaaagaagcaaaaagaggtccttgagctcttttcgcagggagtcttt
aacgtgctcgtagcgacgagcgtcggtgaagaggggttagacgtccccgaagttgatttg
gtcgtcttttatgagccagttccatctgcaattaggagcatccaaaggagaggaagaaca
ggaaggcacagacccgggcgcgtggtagttctaatggctcgtgggacgagagatgaggct
tattattggagctctcggagaaaggagaaggctatgtttgttacgcttaaaaaggtgagt
gagatggttaagagggagaagcaagcctcgcttttaggatttatgggaacaaaagcaaag
gaggaggcaaaacatgagaaagagcctcctaaagaagaggcacttcctgttaagcccatt
tttgttaagaagcctaagggaatagttgtttacgttgattcgcgtgagcttaagagccaa
gtaccaaaatatctcaaggagctcggagcggagattcaggttaaaaccctcgatgttgga
gattacgttgtgagtgaagacgttgcggtggagaggaaatcggcaaacgattttattcaa
tcacttatcgatgggcgcctatttgagcagatggggcgtttgaaggatgcttatctgagg
ccgatagttatcgtcgaaggccagctttacgggattagaaacgttcatccaaacgctatt
aggggggctttggcggcagttgcgctcgattggggtgttccaatactcttttcaaacgat
gctaaggagacggcccagtttatctacctcatagctaggagagagcaggaggaaaggaag
aaagaggtttctcttaggggcgagaagaaagctctaactttagcggagaggcaaaggctg
attgtggaaggtttaccaaacgtttctgctacgctggcgaagcgccttctaaagcacttt
ggaagcgtagagcgcgtgtttaccgccaccgaagaagagctcatggaagtggaaggcatt
ggtgaaaagaaggcgagagaaataagaaaggttataaccgtgccctatgtggatgaggag
aatgaagaaagctaa
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